Merge branch 'master' into anitacaron/issue2651

OBOFoundry · Nov 25, 2024 · dd1a3be · dd1a3be
2 parents ff854d6 + 13620af
commit dd1a3be
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Showing 4 changed files with 59 additions and 13 deletions.
diff --git a/_config.yml b/_config.yml
@@ -10,6 +10,9 @@ author:
   name: OBO Technical WG
 plugins:
   - jekyll-sitemap
+  - jekyll-feed
+feed:
+  disable_in_development: true
 ## --Anything above this line can be edited in _config_header.yml --
 ## --Everything below this line automatically generated in _config.yml --
 ontologies:

diff --git a/_config_header.yml b/_config_header.yml
@@ -10,5 +10,8 @@ author:
   name: OBO Technical WG
 plugins:
   - jekyll-sitemap
+  - jekyll-feed
+feed:
+  disable_in_development: true
 ## --Anything above this line can be edited in _config_header.yml --
 ## --Everything below this line automatically generated in _config.yml --
diff --git a/_includes/head.html b/_includes/head.html
@@ -14,6 +14,8 @@
 <!-- Custom stylesheet -->
 <link rel="stylesheet" href="/assets/css/style.css">
 
+{% feed_meta %}
+
 <style>
 html, body {
     height: 100%;

diff --git a/_layouts/ontology_detail.html b/_layouts/ontology_detail.html
@@ -55,31 +55,69 @@ <h1>
     <div class="card" style="margin-bottom: 1.5em;">
       <div class="card-body">
         <!-- TODO: each ontology should configure which browsers to be exposed in -->
-        <a href="https://ontobee.org/ontology/{{page.id}}" class="btn btn-outline-primary">
+        <a href="https://ontobee.org/ontology/{{page.id}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
           OntoBee
         </a>
         {% if page.aberowl_id %}
-        <a href="http://aber-owl.net/ontology/{{page.aberowl_id | upcase}}" class="btn btn-outline-primary">
-          AberOWL
-        </a>
+          <a href="http://aber-owl.net/ontology/{{page.aberowl_id | upcase}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
+            AberOWL
+          </a>
         {% else %}
-        <a href="http://aber-owl.net/ontology/{{page.id | upcase}}" class="btn btn-outline-primary">
-          AberOWL
-        </a>
+          <a href="http://aber-owl.net/ontology/{{page.id | upcase}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
+            AberOWL
+          </a>
         {% endif %}
-        <a href="http://www.ebi.ac.uk/ols/ontologies/{{page.id}}" class="btn btn-outline-primary">
+        <a href="http://www.ebi.ac.uk/ols/ontologies/{{page.id}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
           OLS
         </a>
+        {% assign skip_bioportal = false %}
+        {% for browser in page.browsers %}
+          {% if browser.label == "BioPortal" %}
+            {% assign skip_bioportal = true %}
+          {% endif %}
+        {% endfor %}
+
+        {% unless skip_bioportal %}
+          {% assign bioportal_id = page.id | upcase %}
+          {% if bioportal_id == 'FBBT' %}
+            {% assign bioportal_id = 'FB-BT' %}
+          {% elsif bioportal_id == 'RO' %}
+            {% assign bioportal_id = 'OBOREL' %}
+          {% elsif bioportal_id == 'APOLLO_SV' %}
+            {% assign bioportal_id = 'APOLLO-SV' %}
+          {% elsif bioportal_id == 'TRANS' %}
+            {% assign bioportal_id = 'PTRANS' %}
+          {% elsif bioportal_id == 'WBLS' %}
+            {% assign bioportal_id = 'WB-LS' %}
+          {% elsif bioportal_id == 'FBDV' %}
+            {% assign bioportal_id = 'FB-DV' %}
+          {% elsif bioportal_id == 'WBBT' %}
+            {% assign bioportal_id = 'WB-BT' %}
+          {% elsif bioportal_id == 'WBPHENOTYPE' %}
+            {% assign bioportal_id = 'WB-PHENOTYPE' %}
+          {% elsif bioportal_id == 'TO' %}
+            {% assign bioportal_id = 'PTO' %}
+          {% elsif bioportal_id == 'FBCV' %}
+            {% assign bioportal_id = 'FB-CV' %}
+          {% elsif bioportal_id == 'MOD' %}
+            {% assign bioportal_id = 'PSIMOD' %}
+          {% elsif bioportal_id == 'PSO' %}
+            {% assign bioportal_id = 'PLANTSO' %}
+          {% endif %}
+          <a href="https://bioportal.bioontology.org/ontologies/{{ bioportal_id }}" class="btn btn-outline-primary" target="_blank" rel="noopener">
+            BioPortal
+          </a>
+        {% endunless %}
         {% for b in page.browsers %}
-        <a href="{{b.url}}" class="btn btn-outline-primary">
-          {{b.label}}
-        </a>
+          <a href="{{b.url}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
+            {{b.label}}
+          </a>
         {% endfor %}
-        <a href="https://bioregistry.io/metaregistry/obofoundry/{{page.id}}" class="btn btn-outline-primary">
+        <a href="https://bioregistry.io/metaregistry/obofoundry/{{page.id}}" class="btn btn-outline-primary" target="_blank" rel="noopener">
          Bioregistry
         </a>
         {% if stripped_content_size > 0 %}
-        <p class="card-text">{{ content }}</p>
+          <p class="card-text">{{ content }}</p>
         {% endif %}
       </div>
     </div>