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Structure membership information (#2117)
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* Start updating membership storage

* Add unit tests

* Update TechnicalWG.md

* Get remaining data

* Add technical working group structured data

* Add editorial

* Add links and update pages

* Update OperationsCommittee.md

* Update

* ORCID required

* Add ORCIDs for alumni

Still need:
- Eric Douglass
- Gareth Owen
- Carlo Tornial

* Update Membership.md

* Merge data based on Nico's request

* Split out country - show massive USA centric nature of OBO ops

* Add sort by name

* Standardize sort order of operations.yml

* Lint

* Update test_memberships.py

* Update obo-test.yml
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cthoyt authored Oct 1, 2022
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2 changes: 1 addition & 1 deletion .github/workflows/obo-test.yml
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Expand Up @@ -16,7 +16,7 @@ jobs:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: '3.6'
python-version: '3.9'
- name: Install requirements
run: |
python3 -m pip install -r requirements.txt
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26 changes: 26 additions & 0 deletions _data/alumni.yml
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members:
- name: Michael Ashburner
orcid: 0000-0002-6962-2807
- name: Colin Batchelor
orcid: 0000-0001-5985-7429
- name: Mathias Brochhausen
orcid: 0000-0003-1834-3856
- name: Melanie Courtot
link: http://purl.org/net/mcourtot
orcid: 0000-0002-9551-6370
- name: Eric Douglass
- name: Janna Hastings
orcid: 0000-0002-3469-4923
- name: Simon Jupp
note: OBO Industry Liaison
orcid: 0000-0002-0643-3144
- name: Suzanna Lewis
link: https://github.com/selewis
orcid: 0000-0002-8343-612X
- name: James Malone
note: OBO Industry Liaison
orcid: 0000-0002-1615-2899
- name: Gareth Owen
- name: Susanna-Assunta Sansone
orcid: 0000-0001-5306-5690
- name: Carlo Tornial
199 changes: 199 additions & 0 deletions _data/operations.yml
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members:
- affiliation: University at Buffalo, Buffalo
country: USA
groups:
- outreach
link: http://sciencecommons.org/about/whoweare/ruttenberg/
name: Alan Ruttenberg
orcid: 0000-0002-1604-3078
- affiliation: University at Buffalo, Buffalo, NY
country: USA
groups:
- technical
name: Alexander Diehl
orcid: 0000-0001-9990-8331
- affiliation: University at Buffalo, Buffalo, NY
country: USA
groups:
- outreach
name: Barry Smith
orcid: 0000-0003-1384-116X
- affiliation: University of Florida, Gainseville, FL
country: USA
groups:
- editorial
name: Bill Duncan
orcid: 0000-0001-9625-1899
- affiliation: University of Florida, Gainseville, FL
country: USA
groups:
- editorial
name: Bill Hogan
orcid: 0000-0002-9881-1017
- affiliation: La Jolla Institute for Immunology, La Jolla, CA
country: USA
groups:
- editorial
name: Bjoern Peters
orcid: 0000-0002-8457-6693
- affiliation: Lawrence Berkeley National Laboratory, Berkeley, CA
country: USA
groups:
- technical
link: https://github.com/cmungall/
name: Chris Mungall
orcid: 0000-0002-6601-2165
- affiliation: University of Pennsylvania, Philadelphia, PA
country: USA
groups:
- outreach
- editorial
name: Chris Stoeckert
orcid: 0000-0002-5714-991X
- affiliation: Centre for Infectious Disease Genomics and One Health, Simon Fraser University, BC
country: Canada
groups:
- outreach
name: Damion Dooley
orcid: 0000-0002-8844-9165
- affiliation: Georgetown University Medical Center, Washington DC
country: USA
groups:
- editorial
link: http://pir.georgetown.edu/pirwww/aboutpir/natalebio.shtml
name: Darren Natale
orcid: 0000-0001-5809-9523
- affiliation: EMBL-EBI, Cambridge
country: UK
groups:
- outreach
name: David Osumi-Sutherland
orcid: 0000-0002-7073-9172
- affiliation: Kansas State University, Manhattan, KS
country: USA
groups:
- editorial
- outreach
name: "Hande K\xFC\xE7\xFCk McGinty"
orcid: 0000-0002-9025-5538
- affiliation: La Jolla Institute for Immunology, La Jolla, CA
country: USA
groups:
- outreach
name: Hector Guzman-Orozco
orcid: 0000-0003-3430-8997
- affiliation: Knocean Inc., Toronto
country: Canada
groups:
- technical
link: http://james.overton.ca/
name: James A. Overton
orcid: 0000-0001-5139-5557
- affiliation: University of Pennsylvania, Philadelphia, PA
country: USA
groups:
- outreach
- technical
link: http://cbil.upenn.edu/profile-staff_bio/39
name: Jie Zheng
orcid: 0000-0002-2999-0103
- affiliation: RENCI, University of North Carolina, Chapel Hill, NC
country: USA
groups:
- technical
name: Jim Balhoff
orcid: 0000-0002-8688-6599
- affiliation: University of Maryland School of Medicine, Baltimore, MD
country: USA
groups:
- editorial
- outreach
link: http://www.medschool.umaryland.edu/profiles/Schriml-Lynn/
name: Lynn Schriml
orcid: 0000-0001-8910-9851
- affiliation: Unversity of Colorado Anschutz Medical Campus, Auroa, CO
country: USA
groups:
- technical
name: Matt Brush
orcid: 0000-0002-1048-5019
- affiliation: Unversity of Colorado Anschutz Medical Campus, Auroa, CO
country: USA
groups:
- outreach
link: https://www.ohsu.edu/people/melissa-haendel/AFE044BDE8046E5D6FBDA51F448BDE2A
name: Melissa Haendel
orcid: 0000-0001-9114-8737
- affiliation: Semanticly, Athens
country: Greece
groups:
- technical
name: Nico Matentzoglu
orcid: 0000-0002-7356-1779
- affiliation: Unversity of Colorado Anschutz Medical Campus, Auroa, CO
country: USA
groups:
- editorial
- outreach
name: Nicole Vasilevsky
orcid: 0000-0001-5208-3432
- affiliation: Lawrence Berkeley National Laboratory, Berkeley, CA
country: USA
groups:
- outreach
- technical
name: Nomi Harris
orcid: 0000-0001-6315-3707
- affiliation: University of Oxford e-Research Centre, Department of Engineering Science, Oxford
country: UK
groups:
- outreach
link: https://eng.ox.ac.uk/people/philippe-rocca-serra/
name: Philippe Rocca-Serra
orcid: 0000-0001-9853-5668
- affiliation: Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven
country: Germany
groups:
- editorial
- outreach
name: Pier Luigi Buttigieg
orcid: 0000-0002-4366-3088
- affiliation: CyVerse, University of Arizona, Tucson, AZ
country: USA
groups:
- technical
- editorial
link: http://www.cyverse.org/ramona-walls
name: Ramona Walls
orcid: 0000-0001-8815-0078
- affiliation: La Jolla Institute for Immunology, La Jolla, CA
country: USA
groups:
- outreach
name: Randi Vita
orcid: 0000-0001-8957-7612
- affiliation: Intelligent Medical Objects (IMO), Rosemont, IL
country: USA
groups:
- technical
name: Rebecca Jackson
orcid: 0000-0003-4871-5569
- affiliation: J. Craig Venter Institute, La Jolla, CA
country: USA
groups:
- outreach
link: https://www.jcvi.org/about/rscheuermann
name: Richard Scheuermann
orcid: 0000-0003-1355-892X
- affiliation: Lawrence Berkeley National Laboratory, Berkeley, CA
country: USA
groups:
- technical
name: Seth Carbon
orcid: 0000-0001-8244-1536
- affiliation: European Bioinformatics Institute, Cambridge
country: UK
groups:
- technical
name: Shawn Tan
orcid: 0000-0001-7258-9596
55 changes: 34 additions & 21 deletions docs/EditorialWG.md
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Expand Up @@ -4,13 +4,9 @@ id: EditorialWG
title: Editorial Working Group
---

This page describes members and activities of the OBO Foundry Editorial Working Group.

# Details

The primary task of the Editorial WG is to facilitate the review of candidate OBO Foundry ontologies. This task includes developing the principles against which ontologies are reviewed, developing the review process itself, conducting the reviews, and setting policies governing the process.

# Scope
## Scope

The OBO Foundry Editorial WG will:

Expand All @@ -20,29 +16,46 @@ The OBO Foundry Editorial WG will:

Current activities are focused on creating guidelines for reviews. Once those guidelines are in place, the working group will shift its focus to carrying out the review process, with an aim of reducing the backlog of ontologies awaiting review.

# Draft guidelines and policies

## Ontology Review
## Draft guidelines and policies

[Ontology review process guidelines](/docs/ReviewProcessGuidelines.html)
### Ontology Review

[Ontology review criteria policies](/docs/ReviewCriteriaPolicies.html)
- [Ontology review process guidelines](/docs/ReviewProcessGuidelines.html)
- [Ontology review criteria policies](/docs/ReviewCriteriaPolicies.html)
- [Ontology review management guidelines](/docs/ReviewManagementGuidelines.html)

[Ontology review management guidelines](/docs/ReviewManagementGuidelines.html)

## Principles Review
### Principles Review

[Principles review workflow](/docs/PrinciplesReviewWorkflow.html)

# Members

See the [membership page](/docs/Membership.html) for a list of current members.

Membership in the OBO Foundry Editorial WG is open to all members of the OBO Foundry Operations Committee who are willing to actively participate. If you are interested in joining the working group, send an email to the mailing list.<br>
<br>

<h1>Contact Us</h1>
## Contact Us

The best way to contact the OBO Foundry Editorial Working Group is through the <a href='https://github.com/OBOFoundry/OBOFoundry.github.io/issues/'>issue tracker</a>.<br>
<br>
The mailing list for the OBO Foundry Editorial Working Group is <a href='mailto:[email protected]'>[email protected]</a>. This is currently a closed list, but non-members can post to the list.

## Members

Membership in the OBO Foundry Editorial WG is open to all members of the OBO Foundry Operations Committee who are willing to actively participate. If you are interested in joining the working group, send an email to the mailing list.

<table class="table">
<thead>
<tr>
<th role="columnheader">Name</th>
<th role="columnheader">ORCID</th>
<th role="columnheader">Affiliation</th>
<th role="columnheader">Country</th>
</tr>
</thead>
<tbody>
{% assign members = site.data.operations.members | sort: "name" | where_exp:"item","item.groups contains 'editorial'" %}
{% for member in members %}
<tr>
<td>{% if member.link %}<a href="{{ member.link }}">{{ member.name }}</a>{% else %}{{ member.name }}{% endif %}</td>
<td><a href="https://orcid.org/{{ member.orcid }}">{{ member.orcid }}</a></td>
<td>{{ member.affiliation }}</td>
<td>{{ member.country }}</td>
</tr>
{% endfor %}
</tbody>
</table>
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