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Update OBO foundry metadata #2636

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Sep 12, 2024
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Update OBO foundry metadata #2636

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32 changes: 32 additions & 0 deletions _config.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -6308,11 +6308,43 @@ ontologies:
products:
- id: stato.owl
ontology_purl: http://purl.obolibrary.org/obo/stato.owl
publications:
- id: https://www.ncbi.nlm.nih.gov/pubmed/31831744
title: Experiment design driven FAIRification of omics data matrices, an exemplar
- id: https://www.ncbi.nlm.nih.gov/pubmed/32109232
title: Semantic concept schema of the linear mixed model of experimental observations
repository: https://github.com/ISA-tools/stato
tags:
- statistics
title: The Statistical Methods Ontology
tracker: https://github.com/ISA-tools/stato/issues
usages:
- description: struct (Statistics in R using Class-based Templates), Struct integrates
with the STATistics Ontology to ensure consistent reporting and maximizes semantic
interoperability
publications:
- id: https://www.ncbi.nlm.nih.gov/pubmed/33325493
title: 'struct: an R/Bioconductor-based framework for standardized metabolomics
data analysis and beyond'
type: annotation
user: https://bioconductor.org/packages/release/bioc/html/struct.html
- description: Scientific Evidence Code System (SEVCO) on the FEvIR platform. The
FEvIR Platform includes many Builder Tools to create FHIR Resources without
requiring expertise in FHIR or JSON, and Converter Tools to convert structured
data to FHIR Resources
publications:
- id: https://www.ncbi.nlm.nih.gov/pubmed/33486066
title: 'Making science computable: Developing code systems for statistics, study
design, and risk of bias'
type: annotation
user: https://fevir.net/resources/CodeSystem/27270#STATO:0000039
- description: OBCS
publications:
- id: https://www.ncbi.nlm.nih.gov/pubmed/27627881
title: The Ontology of Biological and Clinical Statistics (OBCS) for standardized
and reproducible statistical analysis
type: annotation
user: https://github.com/obcs/obcs
- activity_status: active
contact:
email: [email protected]
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47 changes: 46 additions & 1 deletion registry/ontologies.jsonld
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Original file line number Diff line number Diff line change
Expand Up @@ -8812,12 +8812,57 @@
"ontology_purl": "http://purl.obolibrary.org/obo/stato.owl"
}
],
"publications": [
{
"id": "https://www.ncbi.nlm.nih.gov/pubmed/31831744",
"title": "Experiment design driven FAIRification of omics data matrices, an exemplar"
},
{
"id": "https://www.ncbi.nlm.nih.gov/pubmed/32109232",
"title": "Semantic concept schema of the linear mixed model of experimental observations"
}
],
"repository": "https://github.com/ISA-tools/stato",
"tags": [
"statistics"
],
"title": "The Statistical Methods Ontology",
"tracker": "https://github.com/ISA-tools/stato/issues"
"tracker": "https://github.com/ISA-tools/stato/issues",
"usages": [
{
"description": "struct (Statistics in R using Class-based Templates), Struct integrates with the STATistics Ontology to ensure consistent reporting and maximizes semantic interoperability",
"publications": [
{
"id": "https://www.ncbi.nlm.nih.gov/pubmed/33325493",
"title": "struct: an R/Bioconductor-based framework for standardized metabolomics data analysis and beyond"
}
],
"type": "annotation",
"user": "https://bioconductor.org/packages/release/bioc/html/struct.html"
},
{
"description": "Scientific Evidence Code System (SEVCO) on the FEvIR platform. The FEvIR Platform includes many Builder Tools to create FHIR Resources without requiring expertise in FHIR or JSON, and Converter Tools to convert structured data to FHIR Resources",
"publications": [
{
"id": "https://www.ncbi.nlm.nih.gov/pubmed/33486066",
"title": "Making science computable: Developing code systems for statistics, study design, and risk of bias"
}
],
"type": "annotation",
"user": "https://fevir.net/resources/CodeSystem/27270#STATO:0000039"
},
{
"description": "OBCS",
"publications": [
{
"id": "https://www.ncbi.nlm.nih.gov/pubmed/27627881",
"title": "The Ontology of Biological and Clinical Statistics (OBCS) for standardized and reproducible statistical analysis"
}
],
"type": "annotation",
"user": "https://github.com/obcs/obcs"
}
]
},
{
"activity_status": "active",
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