Osfm repo

[zyioump]

No description provided.

[Valdimus]

I try to redeploy on our servers, I have several issues:

• Dependency links option is delete from new version of pip #57
• Celery service don't start because OpenSFM is missing.

[Valdimus]

We don't test if command failed on :

https://github.com/OpenPathView/OPV_Ansible/blob/master/roles/base/tasks/opensfm.yml#L39-L49

So, for ansible all is ok but in fact, opensfm is not installed. It explained why Celery worker refuse to start with opensfm python module missing.

The error appears when we try to build Opensfm:

(opv) opv@opv-worker1:~/OpenSfM$ python3 setup.py build
Configuring for python 3.5...
-- The C compiler identification is GNU 5.4.0
-- The CXX compiler identification is GNU 5.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Error at CMakeLists.txt:23 (add_subdirectory):
  The source directory

    /home/opv/OpenSfM/opensfm/src/third_party/pybind11

  does not contain a CMakeLists.txt file.


-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp  
-- Looking for dgemm_
-- Looking for dgemm_ - found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- A library with BLAS API found.
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- A library with BLAS API found.
-- Found AMD library: /usr/lib/x86_64-linux-gnu/libamd.so
-- Found AMD header in: /usr/include/suitesparse
-- Found CAMD library: /usr/lib/x86_64-linux-gnu/libcamd.so
-- Found CAMD header in: /usr/include/suitesparse
-- Found COLAMD library: /usr/lib/x86_64-linux-gnu/libcolamd.so
-- Found COLAMD header in: /usr/include/suitesparse
-- Found CCOLAMD library: /usr/lib/x86_64-linux-gnu/libccolamd.so
-- Found CCOLAMD header in: /usr/include/suitesparse
-- Found CHOLMOD library: /usr/lib/x86_64-linux-gnu/libcholmod.so
-- Found CHOLMOD header in: /usr/include/suitesparse
-- Found CXSPARSE library: /usr/lib/x86_64-linux-gnu/libcxsparse.so
-- Found SuiteSparseQR library: /usr/lib/x86_64-linux-gnu/libspqr.so
-- Found SuiteSparseQR header in: /usr/include/suitesparse
-- Did not find Intel TBB library, assuming SuiteSparseQR was not compiled with TBB.
-- Found SuiteSparse_config library: /usr/lib/x86_64-linux-gnu/libsuitesparseconfig.so
-- Found SuiteSparse_config header in: /usr/include/suitesparse
-- Adding librt: /usr/lib/x86_64-linux-gnu/librt.so to SuiteSparse_config libraries (required on Linux & Unix [not OSX] if SuiteSparse is compiled with timing).
-- Did not find METIS library (optional SuiteSparse dependency)
-- Found SuiteSparse: TRUE (found version "4.4.6") 
-- Found Eigen: /usr/include/eigen3 (found version "3.2.92") 
-- Found ceres: /usr/local/lib/libceres.a  
-- No preference for use of exported gflags CMake configuration set, and no hints for include/library directories provided. Defaulting to preferring an installed/exported gflags CMake configuration if available.
-- Failed to find installed gflags CMake configuration, searching for gflags build directories exported with CMake.
-- Failed to find an installed/exported CMake configuration for gflags, will perform search for installed gflags components.
-- Performing Test GFLAGS_IN_GOOGLE_NAMESPACE
-- Performing Test GFLAGS_IN_GOOGLE_NAMESPACE - Success
-- Found Gflags: /usr/include  
-- Found Glog: /usr/include  
CMake Error at CMakeLists.txt:88 (pybind11_add_module):
  Unknown CMake command "pybind11_add_module".


-- Configuring incomplete, errors occurred!
See also "/home/opv/OpenSfM/cmake_build/CMakeFiles/CMakeOutput.log".
Traceback (most recent call last):
  File "setup.py", line 48, in <module>
    configure_c_extension()
  File "setup.py", line 39, in configure_c_extension
    subprocess.check_call(cmake_command, cwd='cmake_build')
  File "/usr/lib/python3.5/subprocess.py", line 581, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['cmake', '../opensfm/src', '-DPYTHON_EXECUTABLE=/home/opv/venvs/opv/bin/python3']' returned non-zero exit status 1

After some digging, I found that for the new version of OpenSFM, we need to get all the submodule:

https://docs.opensfm.org/building.html#download