update cran-comments

ref #479

cran-comments.md

@@ -1,7 +1,7 @@
 Description
 ===============================================
 
-This submission is primarily to address a recent change in the REDCap server.
+This submission is primarily to address a change in the REDCap server.  A lot of packages additions in the meantime were building up.
 
 Thank you for taking the time to review my submission, and please tell me if there's something else I should do for CRAN.  -Will Beasley
 
@@ -11,10 +11,10 @@ Test environments
 1. Local Ubuntu, R 4.2.2
 2. Local Win11, R 4.3.1 patched
 3. R-hub
-    1. [Ubuntu Linux, R-release, GCC](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-ca31dc0eef2e4d6f82ea439a64125d94)
-    2. [Fedora Linux, R-devel, clang, gfortran](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-04e47bc289634445aeafd374a16db8d3)
-    3. [Windows Server](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-a8833d5bd66847c38c3890470eb2d97a)
-4. [win-builder](https://win-builder.r-project.org/BS3KTA59FLDi/), development version.
+    1. [Ubuntu Linux, R-release, GCC](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-746e237d11914129b4410114fbfa2c83)
+    2. [Fedora Linux, R-devel, clang, gfortran](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-e695d8a48601419e8059863cc80964b7)
+    3. [Windows Server](https://builder.r-hub.io/status/REDCapR_1.1.9005.tar.gz-c30d344462dc43a4b03e68a33be664d9)
+4. [win-builder](https://win-builder.r-project.org/0u5J1JiksFZg/), development version.
 5. [GiHub Actions](https://github.com/OuhscBbmc/REDCapR/actions), Ubuntu 22.04 LTS
 
 R CMD check results
@@ -43,8 +43,11 @@ R CMD check results
 Downstream dependencies
 -----------------------------------------------
 
-Packages that depend/import/suggest REDCapR pass checks with `revdepcheck::revdep_check()`.
-I talked to the tidyREDCap developer last month, and he says the problem is unrelated to REDCapR.
+With one exception,
+packages that depend/import/suggest REDCapR pass checks with `revdepcheck::revdep_check()`.
+
+I worked with **tidyREDCap** team and they accepted a PR that fixes the problem:
+<https://github.com/RaymondBalise/tidyREDCap/pull/61>.
 
 package                                  | E        | W        | N
 -------                                  | -        | -        | -

revdep/README.md

@@ -10,7 +10,7 @@
 |collate  |English_United States.utf8                       |
 |ctype    |English_United States.utf8                       |
 |tz       |America/Chicago                                  |
-|date     |2023-07-11                                       |
+|date     |2023-07-14                                       |
 |rstudio  |2023.06.1+524 Mountain Hydrangea (desktop)       |
 |pandoc   |3.1.5 @ C:\PROGRA~1\Pandoc\pandoc.exe            |
 

utility/refresh.R

@@ -4,15 +4,15 @@ options(device = deviceType) #https://support.rstudio.org/help/discussions/probl
 
 spelling::spell_check_package()
 # spelling::update_wordlist()
-lintr::lint_package()
-# lintr::lint("R/redcap-metadata-coltypes.R")
 urlchecker::url_check(); urlchecker::url_update()
 
 devtools::document()
 devtools::check_man() #Should return NULL
 devtools::clean_vignettes()
 devtools::build_vignettes()
 
+lintr::lint_package()
+# lintr::lint("R/redcap-metadata-coltypes.R")
 checks_to_exclude <- c(
   "covr",
   "cyclocomp",
@@ -29,6 +29,8 @@ goodpractice::results(gp)
 gp
 # If necessary: tinytex::tlmgr_install("makeindex")
 BiocCheck::BiocCheck()
+# styler::style_pkg()
+# styler::style_file("R/redcap-read-oneshot.R")
 
 devtools::document()
 pkgdown::clean_site()
@@ -40,10 +42,9 @@ devtools::run_examples(); #dev.off() #This overwrites the NAMESPACE file too
 # devtools::run_examples(, "redcap_read.Rd")
 # pkgload::load_all()
 test_results_checked <- devtools::test()
-test_results_checked <- devtools::test(filter = "read-batch-survey")
 test_results_checked <- devtools::test(filter = "^validate")
-withr::local_envvar(ONLYREADTESTS = "true")
-test_results_checked <- devtools::test(filter = "write-batch")
+# withr::local_envvar(ONLYREADTESTS = "true")
+# test_results_checked <- devtools::test(filter = "write-batch")
 
 # testthat::test_dir("./tests/")
 test_results_not_checked <- testthat::test_dir("./tests/manual/")
@@ -55,6 +56,7 @@ devtools::check( # Equivalent of R-hub
   remote    = TRUE,
   incoming  = TRUE
 )
+rhub::list_validated_emails(); # rhub::validate_email()
 rhub::check_for_cran(email="[email protected]")
 # devtools::check_win_devel() # CRAN submission policies encourage the development version
 # revdepcheck::revdep_check(num_workers = 4)