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Avoid overriding metadata in DownloadGeoSample and DownloadSraExperiment Python Package using Conda #132: Commit 16f249d pushed by arteymix
August 13, 2024 19:24 2m 28s master
master
August 13, 2024 19:24 2m 28s
Make SubmitExperimentReportToGemma rerunnable Python Package using Conda #131: Commit ae02f56 pushed by arteymix
August 13, 2024 17:43 2m 59s master
master
August 13, 2024 17:43 2m 59s
Drop the paired_read_expeirments option and simplify pairedness check Python Package using Conda #130: Commit fed06f5 pushed by arteymix
August 13, 2024 17:43 2m 42s master
master
August 13, 2024 17:43 2m 42s
Add a 2 hours walltime limit for prefetch tasks Python Package using Conda #129: Commit 7ba68a1 pushed by arteymix
August 13, 2024 17:21 2m 41s master
master
August 13, 2024 17:21 2m 41s
Improve logic for detecting bulk RNA-Seq datasets Python Package using Conda #128: Commit 1a660ed pushed by arteymix
July 3, 2024 17:49 1m 38s master
master
July 3, 2024 17:49 1m 38s
Addresses missing spots_with_mates column in SRA runinfo (fix #93) Python Package using Conda #127: Commit b626a41 pushed by arteymix
June 25, 2024 19:23 1m 38s master
master
June 25, 2024 19:23 1m 38s
Remove -f flag when calling fillBatchInfo Python Package using Conda #126: Commit 51d5874 pushed by arteymix
June 14, 2024 21:43 1m 35s master
master
June 14, 2024 21:43 1m 35s
Bump min requirement for bioluigi to 0.3.4 Python Package using Conda #125: Commit a34826a pushed by arteymix
June 7, 2024 19:40 1m 31s master
master
June 7, 2024 19:40 1m 31s
Perform sample renaming for the MultiQC report Python Package using Conda #124: Commit 56984af pushed by arteymix
June 7, 2024 19:38 1m 29s master
master
June 7, 2024 19:38 1m 29s
Add a systemd unit for running the pipeline and use conda run Python Package using Conda #123: Commit fb399fa pushed by arteymix
May 23, 2024 23:32 1m 31s master
master
May 23, 2024 23:32 1m 31s
Add ssRNA-seq to the list of supported strategies Python Package using Conda #122: Commit 4352fec pushed by arteymix
May 21, 2024 23:14 1m 31s master
master
May 21, 2024 23:14 1m 31s
Fix rename of GemmaTask to GemmaTaskMixin and GemmaCliTask Python Package using Conda #121: Commit cdbe165 pushed by arteymix
May 21, 2024 20:40 1m 40s master
master
May 21, 2024 20:40 1m 40s
Relocate Gemma-specific configuration under [rnaseq_pipeline.gemma] Python Package using Conda #120: Commit ab6b567 pushed by arteymix
May 21, 2024 20:40 1m 31s master
master
May 21, 2024 20:40 1m 31s
Make Gemma's appdata directory configurable Python Package using Conda #119: Commit ac1da2a pushed by arteymix
May 21, 2024 20:39 1m 33s master
master
May 21, 2024 20:39 1m 33s
Remove unused STAR_CLEANUP_SCRIPT config Python Package using Conda #118: Commit acf0e84 pushed by arteymix
May 17, 2024 17:50 1m 43s master
master
May 17, 2024 17:50 1m 43s
Add a script for synchronizing the MultiQC reports Python Package using Conda #117: Commit 31f8199 pushed by arteymix
May 9, 2024 22:55 1m 34s master
master
May 9, 2024 22:55 1m 34s
Few fixes for the webviewer Python Package using Conda #116: Commit 533d237 pushed by arteymix
March 20, 2024 17:20 1m 11s master
master
March 20, 2024 17:20 1m 11s
Fix duplicated keys in metadata dict Python Package using Conda #115: Commit 71c0247 pushed by arteymix
March 13, 2024 21:56 1m 23s master
master
March 13, 2024 21:56 1m 23s
Fix duplicated keys in metadata dict Python Package using Conda #114: Commit b9ff1d8 pushed by arteymix
March 13, 2024 21:56 2m 50s master
master
March 13, 2024 21:56 2m 50s
Ensure that sample_id and experiment_id are passed when extracting ba… Python Package using Conda #113: Commit 20a570d pushed by arteymix
March 13, 2024 21:36 1m 28s master
master
March 13, 2024 21:36 1m 28s
Move metadata mixin to DownloadGeoSampleMetadata Python Package using Conda #112: Commit 0226f3c pushed by arteymix
March 7, 2024 00:30 1m 14s master
master
March 7, 2024 00:30 1m 14s
Bump patch version to 2.1.12 Python Package using Conda #111: Commit 85ca58f pushed by arteymix
March 6, 2024 22:29 1m 8s v2.1.12
v2.1.12
March 6, 2024 22:29 1m 8s
Bump patch version to 2.1.12 Python Package using Conda #110: Commit 85ca58f pushed by arteymix
March 6, 2024 22:29 1m 9s master
master
March 6, 2024 22:29 1m 9s
Set minimum version of bioluigi to 0.1.3 Python Package using Conda #109: Commit a975ef8 pushed by arteymix
March 6, 2024 22:29 1m 11s master
master
March 6, 2024 22:29 1m 11s
ci: Update actions Python Package using Conda #108: Commit f1be072 pushed by arteymix
March 5, 2024 20:04 2m 17s master
master
March 5, 2024 20:04 2m 17s