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revert accidental remote log file changes
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,12 +1,55 @@ | ||
| * using log directory ‘/tmp/RtmpqErjWC/PEcAn.data.remote.Rcheck’ | ||
| * using R version 4.1.3 (2022-03-10) | ||
| * using log directory ‘/home/tanishq010/pecan/modules/PEcAn.data.remote.Rcheck’ | ||
| * using R version 4.2.1 (2022-06-23) | ||
| * using platform: x86_64-pc-linux-gnu (64-bit) | ||
| * using session charset: UTF-8 | ||
| * using options ‘--no-manual --as-cran’ | ||
| * using options ‘--no-tests --no-manual --as-cran’ | ||
| * checking for file ‘PEcAn.data.remote/DESCRIPTION’ ... OK | ||
| * checking extension type ... Package | ||
| * this is package ‘PEcAn.data.remote’ version ‘1.7.2.9000’ | ||
| * package encoding: UTF-8 | ||
| * checking CRAN incoming feasibility ... WARNING | ||
| Maintainer: ‘Bailey Morrison <[email protected]>’ | ||
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| New submission | ||
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| Version contains large components (1.7.2.9000) | ||
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| License components with restrictions and base license permitting such: | ||
| BSD_3_clause + file LICENSE | ||
| File 'LICENSE': | ||
| University of Illinois/NCSA Open Source License | ||
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| Copyright (c) 2012, University of Illinois, NCSA. All rights reserved. | ||
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| Permission is hereby granted, free of charge, to any person obtaining | ||
| a copy of this software and associated documentation files (the | ||
| "Software"), to deal with the Software without restriction, including | ||
| without limitation the rights to use, copy, modify, merge, publish, | ||
| distribute, sublicense, and/or sell copies of the Software, and to | ||
| permit persons to whom the Software is furnished to do so, subject to | ||
| the following conditions: | ||
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| - Redistributions of source code must retain the above copyright | ||
| notice, this list of conditions and the following disclaimers. | ||
| - Redistributions in binary form must reproduce the above copyright | ||
| notice, this list of conditions and the following disclaimers in the | ||
| documentation and/or other materials provided with the distribution. | ||
| - Neither the names of University of Illinois, NCSA, nor the names | ||
| of its contributors may be used to endorse or promote products | ||
| derived from this Software without specific prior written permission. | ||
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| THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, | ||
| EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF | ||
| MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. | ||
| IN NO EVENT SHALL THE CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR | ||
| ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF | ||
| CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION | ||
| WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS WITH THE SOFTWARE. | ||
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| Strong dependencies not in mainstream repositories: | ||
| PEcAn.DB, PEcAn.utils, PEcAn.logger, PEcAn.remote | ||
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| The Date field is over a month old. | ||
| * checking package namespace information ... OK | ||
| * checking package dependencies ... OK | ||
| * checking if this is a source package ... OK | ||
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@@ -20,7 +63,11 @@ | |
| * checking installed package size ... OK | ||
| * checking package directory ... OK | ||
| * checking for future file timestamps ... OK | ||
| * checking DESCRIPTION meta-information ... OK | ||
| * checking DESCRIPTION meta-information ... NOTE | ||
| Author field differs from that derived from Authors@R | ||
| Author: ‘Mike Dietze, Bailey Morrison’ | ||
| Authors@R: ‘Mike Dietze [aut], Bailey Morrison [aut, cre], University of Illinois, NCSA [cph]’ | ||
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| * checking top-level files ... OK | ||
| * checking for left-over files ... OK | ||
| * checking index information ... OK | ||
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@@ -33,24 +80,49 @@ | |
| * checking whether the namespace can be loaded with stated dependencies ... OK | ||
| * checking whether the namespace can be unloaded cleanly ... OK | ||
| * checking loading without being on the library search path ... OK | ||
| * checking use of S3 registration ... OK | ||
| * checking dependencies in R code ... WARNING | ||
| 'library' or 'require' calls not declared from: | ||
| ‘PEcAn.DB’ ‘doParallel’ ‘raster’ | ||
| 'library' or 'require' calls in package code: | ||
| ‘PEcAn.DB’ ‘doParallel’ ‘raster’ ‘rgdal’ | ||
| Please use :: or requireNamespace() instead. | ||
| See section 'Suggested packages' in the 'Writing R Extensions' manual. | ||
| Missing or unexported objects: | ||
| ‘PEcAn.utils::download_file’ ‘PEcAn.utils::need_packages’ | ||
| Namespace in Imports field not imported from: ‘stringr’ | ||
| All declared Imports should be used. | ||
| * checking S3 generic/method consistency ... OK | ||
| * checking replacement functions ... OK | ||
| * checking foreign function calls ... OK | ||
| * checking R code for possible problems ... NOTE | ||
| call_MODIS: no visible global function definition for ‘write.csv’ | ||
| download.LandTrendr.AGB: no visible binding for global variable ‘k’ | ||
| download.NLCD: no visible global function definition for ‘dbfile.check’ | ||
| download.NLCD: no visible global function definition for ‘db.query’ | ||
| download.NLCD: no visible global function definition for | ||
| ‘dbfile.insert’ | ||
| download.thredds.AGB : get_data: no visible global function definition | ||
| for ‘write.csv’ | ||
| download.thredds.AGB: no visible global function definition for | ||
| ‘foreach’ | ||
| download.thredds.AGB: no visible global function definition for | ||
| ‘stopCluster’ | ||
| extract_NLCD: no visible global function definition for ‘dbfile.check’ | ||
| extract_NLCD: no visible global function definition for ‘db.query’ | ||
| extract_NLCD: no visible global function definition for ‘raster’ | ||
| extract_NLCD: no visible global function definition for ‘SpatialPoints’ | ||
| extract_NLCD: no visible global function definition for ‘CRS’ | ||
| extract_NLCD: no visible global function definition for ‘spTransform’ | ||
| extract_NLCD: no visible global function definition for ‘crs’ | ||
| extract_NLCD: no visible global function definition for ‘extract’ | ||
| grid2netcdf: no visible binding for global variable ‘years’ | ||
| grid2netcdf: no visible binding for global variable ‘yieldarray’ | ||
| Undefined global functions or variables: | ||
| k years yieldarray | ||
| CRS SpatialPoints crs db.query dbfile.check dbfile.insert | ||
| download.file extract foreach k raster spTransform stopCluster | ||
| write.csv | ||
| Consider adding | ||
| importFrom("utils", "download.file", "write.csv") | ||
| to your NAMESPACE file. | ||
| * checking Rd files ... OK | ||
| * checking Rd metadata ... OK | ||
| * checking Rd line widths ... OK | ||
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@@ -76,9 +148,4 @@ Extensions’ manual. | |
| * checking for detritus in the temp directory ... OK | ||
| * DONE | ||
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| Status: 2 WARNINGs, 1 NOTE | ||
| See | ||
| ‘/tmp/RtmpqErjWC/PEcAn.data.remote.Rcheck/00check.log’ | ||
| for details. | ||
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| Status: 3 WARNINGs, 2 NOTEs | ||