Add functions that can extract and update phenological status based on MODIS data and enable monthly SDA#3249

Merged

mdietze merged 43 commits intoPecanProject:developfrom Qianyuxuan:sda_monthly_modex

Jun 5, 2024

+579-32

Commits on Apr 13, 2023

Adding qsub_parallel module into pecan.
Dongchen Zhang
committed

Commits on Apr 24, 2023

Making the function more robust.
Dongchen Zhang
committed
Adding the gamma parameters' names.
Dongchen Zhang
committed
Correct the way of updating Q.
Dongchen Zhang
committed
Avoid extremely high SoilC.
Dongchen Zhang
committed
Update.
Dongchen Zhang
committed

Commits on Jun 24, 2023

Commits on Jul 17, 2023

Enable monthly SDA
Li
committed
Resolve the confilct
Li
committed

Commits on Aug 22, 2023

Add update_phenology function
Li
committed

Commits on Aug 23, 2023

Resolve conflict when merging Dongchen's PR
Li
committed

Commits on Aug 25, 2023

Merge remote-tracking branch 'Dongchen_branch/develop' into develop
Li
committed

Commits on Sep 1, 2023

Commits on Jan 11, 2024

Add leaf_phenology_extract script and merge from upstream
Li
committed

Commits on Jan 18, 2024

Fix some bugs of block-based SDA run and update phenology_MODIS_extract code
Li
committed

Commits on Jan 19, 2024

Commits on Jan 20, 2024

Update Create_Multi_settings.R to include the path for setting up leaf phenology
Li
committed

Commits on Mar 8, 2024

Pull from upstream and resolve conflicts
Qianyu Li
committed
Revert to multisite mapping approach
Qianyu Li
committed

Commits on Mar 22, 2024

Fix bugs in preparing initial LAI
Qianyu Li
committed
Merge branch 'develop' of https://github.com/PecanProject/pecan into sda_monthly_local
Qianyu Li
committed

Commits on Mar 25, 2024

Delete files that were placed by mistake
Qianyu Li
committed

Commits on Mar 26, 2024

Update per Mike and Chris' comments
Qianyu Li
committed
load the files into a specific envir
Qianyu Li
committed

Commits on Mar 27, 2024

Update default arguments in functions
Qianyu Li
committed

Commits on May 30, 2024

remove timepoint arguement in write_config
Qianyu Li
committed
Resolve conflict after merging
Qianyu Li
committed

Commits on Jun 3, 2024

Update per Mike's comments
Qianyu Li
committed
Small tweak
Qianyu Li
committed

Commits on Jun 4, 2024

Apply suggestions
Qianyu Li
committed
Merge branch 'develop' of https://github.com/PecanProject/pecan into sda_monthly_local
Qianyu Li
committed
Update base/workflow/R/do_conversions.R
mdietze
authored
Update models/sipnet/R/write.configs.SIPNET.R
mdietze
authored
Update models/sipnet/man/write.config.SIPNET.Rd
mdietze
authored
Update document
Qianyu Li
committed
Apply suggestions from code review
mdietze
authored
Update models/sipnet/R/write.configs.SIPNET.R

mdietze
and
infotroph
authored
Update document
Qianyu Li
committed

Commits on Jun 5, 2024

Revert back to filtering
Qianyu Li
committed
Merge branch 'develop' into sda_monthly_modex
mdietze
authored