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create timing files for fracback
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singlesp committed Dec 18, 2024
1 parent 689f901 commit d826e07
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60 changes: 60 additions & 0 deletions curation/create_events/0back.txt
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60 changes: 60 additions & 0 deletions curation/create_events/1back.txt
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60 changes: 60 additions & 0 deletions curation/create_events/2back.txt
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34 changes: 34 additions & 0 deletions curation/create_events/create_fracback_events.py
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import pandas as pd
from glob import glob

# Parameters
input_files = ["0back.txt", "1back.txt", "2back.txt", "instr.txt"]
output_file = "task-fracback_acq-singleband_events.tsv"

# Function to merge consecutive blocks
def merge_blocks(df, trial_type):
df = df.sort_values("onset").reset_index(drop=True)
blocks = []
current_block = {"onset": df.loc[0, "onset"], "duration": df.loc[0, "duration"]}
for i in range(1, len(df)):
if df.loc[i, "onset"] == current_block["onset"] + current_block["duration"]:
current_block["duration"] += df.loc[i, "duration"]
else:
blocks.append(current_block)
current_block = {"onset": df.loc[i, "onset"], "duration": df.loc[i, "duration"]}
blocks.append(current_block)
return pd.DataFrame(blocks).assign(trial_type=trial_type)

# Process all files and combine them
all_events = []
for file in input_files:
trial_type = file.split(".")[0] # Extract trial type from file name
df = pd.read_csv(file, sep="\t", header=None, names=["onset", "duration", "ignore"])
merged_df = merge_blocks(df, trial_type)
all_events.append(merged_df)

# Combine all trial types and save to a BIDS-compatible file
events = pd.concat(all_events).sort_values("onset").reset_index(drop=True)
events.to_csv(output_file, sep="\t", index=False)

print(f"Events file created: {output_file}")
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