Code

Time series plots#31

Code

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MariaGorodetski merged 45 commits intomasterPhenoAI/pheno-utils:masterfrom dev-timeseries-plotPhenoAI/pheno-utils:dev-timeseries-plotCopy head branch name to clipboardNov 11, 2024

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Commits

Commits on Aug 19, 2024

• added: timeseries plots TimeSeriesFigure class

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Commits on Aug 22, 2024

• added: diet_plots plot_bar_meals & plot_lollipop_meals

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Commits on Aug 23, 2024

• improved: docstring

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Commits on Aug 27, 2024

• added: plot_events_fill

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• improved: diet_plots standardised signature

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Commits on Aug 28, 2024

• added: diet_plots.plot_meals_events

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Commits on Aug 29, 2024

• improved: TimeSeriesFigure adjust limits after each plot

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• improved: plot_events_bars inverted y-axis

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Commits on Aug 30, 2024

• renamed: arg color -> hue

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• renamed: arg cmap -> palette

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• improved: plot_meals_lollipop size='total_g'

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• added: config LEGEND_SHIFT

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• improved: plot_events_fill accepts multiple axes

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• improved: legend position

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• improved: re-wrote plot_sleep with new ts funcs

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Commits on Aug 31, 2024

• improved: plot_events_fill behind other plots

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• added: plot_diet_cgm_sleep

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Commits on Sep 1, 2024

• rename: diet plots funcs

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Commits on Sep 2, 2024

• improved: plot_diet_cgm_sleep default channels

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• improved: plot_meals_hbars with size legend

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Commits on Sep 3, 2024

• improved: plot_diet_cgm_sleep diet / cgm on single subplot

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• refactored: second_y arg moved to TimeSeriesFigure.plot

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• improved: plot_diet_cgm_sleep calibration

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• improved: plot_events_bars accepts hue=None

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Commits on Sep 6, 2024

• improved: plot_diet_cgm_sleep accepts kwargs for each subplot

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Commits on Sep 8, 2024

• improved: new args nut_exclude nut_include

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Commits on Sep 9, 2024

• added: get_events_period, get_sleep_period

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Commits on Sep 26, 2024

• chore: PR notes

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Commits on Nov 7, 2024

• renamed: filter_df -> format_timeseries

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• renamed: prepare_events -> prep_to_plot_timeseries

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• added: TimeSeriesFigure.plot args adjust_time, adjust_by_axis

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• fixed: cgm_plots for new example data

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• chore: clean cells

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• improved: timeseries_plots: set_periodic_ticks arg start_time

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• added: timeseries_plots tutorial

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• improved: timeseries_plots: text

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Commits on Nov 8, 2024

• improved: timeseries_plots: text

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• added: sleep_plots tutorial

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• added: diet_plots: tutorial

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• improved: sleep_plots: tutorial

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• improved: timeseries_plots: title

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• improved: diet_plots: food category rename

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• added: new example datasets (time series)

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• fixed: deploy error

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• fixed: deploy error

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