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# This workflow will build a golang project | ||
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-go | ||
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name: Go | ||
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on: | ||
push: | ||
branches: [ "main" ] | ||
pull_request: | ||
branches: [ "main" ] | ||
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jobs: | ||
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build: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v4 | ||
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- name: Set up Go | ||
uses: actions/setup-go@v4 | ||
with: | ||
go-version: '1.20' | ||
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- name: Install linux deps | ||
run: | | ||
sudo apt-get update | ||
sudo apt-get -y install libvips-dev | ||
- name: Build | ||
run: cd src/cmd/main && go build -v main.go | ||
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- name: Test | ||
env: | ||
DATAROOM_API_KEY: ${{ secrets.DATAROOM_API_KEY }} | ||
DATAROOM_TEST_SOURCE: ${{ secrets.DATAROOM_TEST_SOURCE }} | ||
DATAROOM_API_URL: ${{ secrets.DATAROOM_API_URL }} | ||
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run: cd src/tests && go test -v . |
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include *.md | ||
include *.py | ||
include datago/*.h | ||
include datago/*.c | ||
include datago/*.so |
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# datago | ||
A golang-based data loader which can be used from Python. Useful to interact with a typical VectorDB stack for machine learning purposes | ||
[![Build & Test](https://github.com/Photoroom/datago/actions/workflows/go.yml/badge.svg)](https://github.com/Photoroom/datago/actions/workflows/go.yml) | ||
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datago | ||
====== | ||
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A golang-based data loader which can be used from Python. Compatible with a soon-to-be open sourced VectorDB-enabled data stack, which exposes HTTP requests. | ||
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Datago will handle, outside of the Python GIL | ||
- per sample IO from object storage | ||
- deserialization | ||
- some optional vision processing (aligning different image payloads) | ||
- serialization | ||
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Samples are then exposed in the Python scope and ready for consumption, typically using PIL and Numpy base types. | ||
Speed will be network dependent, but GB/s is relatively easily possible | ||
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Datago can be rank and world-size aware, in which case the samples are dispatched depending on the samples hash. | ||
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<img width="922" alt="Screenshot 2024-09-24 at 9 39 44 PM" src="https://github.com/user-attachments/assets/b58002ce-f961-438b-af72-9e1338527365"> | ||
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<details> <summary><strong>Use it</strong></summary> | ||
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Use the package from Python | ||
--------------------------- | ||
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```python | ||
from datago import datago | ||
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# source, has/lacks attributes, has/lacks masks, has/lacks latents, metadata prefetch, sample prefetch, concurrent download | ||
client = datago.GetClient( | ||
source="SOURCE", | ||
require_images=True, | ||
has_attributes="", | ||
lacks_attributes="", | ||
has_masks="", | ||
lacks_masks="", | ||
has_latents="", | ||
lacks_latents="", | ||
crop_and_resize=True, | ||
prefetch_buffer_size=64, | ||
samples_buffer_size=64, | ||
downloads_concurrency=64, | ||
) | ||
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client.Start() # This can be done early for convenience, not mandatory (can fetch samples while models are instanciated for intance) | ||
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for _ in range(10): | ||
sample = client.GetSample() # This start the client if not previously done, in that case latency for the first sample is higher | ||
``` | ||
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Please note that the image buffers will be passed around as raw pointers, they can be re-interpreted in python with the attached helpers | ||
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Match the raw exported buffers with typical python types | ||
-------------------------------------------------------- | ||
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See helper functions provided in `polyglot.py`, should be self explanatory | ||
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</details><details> <summary><strong>Build it</strong></summary> | ||
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Install deps | ||
------------ | ||
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```bash | ||
$ sudo apt install golang libjpeg-turbo8-dev libvips-dev | ||
$ sudo ldconfig | ||
``` | ||
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Build a benchmark CLI | ||
--------------------- | ||
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From the root of this project `datago_src`: | ||
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```bash | ||
$ go build cmd/main/main.go | ||
``` | ||
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Running it: | ||
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```bash | ||
$ ./main --help` will tell you all about it | ||
``` | ||
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Running it with additional sanity checks | ||
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```bash | ||
$ go run -race cmd/main/main.go | ||
``` | ||
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Run the go test suite | ||
--------------------- | ||
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From the src folder | ||
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```bash | ||
$ go test -v tests/client_test.go | ||
``` | ||
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Refresh the python package and its binaries | ||
------------------------------------------- | ||
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- Install the dependencies as detailed in the next point | ||
- Run the `generate_python_package.sh` script | ||
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Generate the python package binaries manually | ||
--------------------------------------------- | ||
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```bash | ||
$ python3 -m pip install pybindgen | ||
$ go install golang.org/x/tools/cmd/goimports@latest | ||
$ go install github.com/go-python/gopy@latest | ||
$ go install golang.org/x/image/draw | ||
``` | ||
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NOTE: | ||
- you may need to add `~/go/bin` to your PATH so that gopy is found. | ||
- - Either `export PATH=$PATH:~/go/bin` or add it to your .bashrc | ||
- you may need this to make sure that LDD looks at the current folder `export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:.` | ||
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then from the /pkg/client folder: | ||
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```bash | ||
$ gopy pkg -author="Photoroom" -email="[email protected]" -url="" -name="datago" -version="0.0.1" . | ||
``` | ||
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then you can `pip install -e .` from here. | ||
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Update the pypi release (maintainers) | ||
------------------------------------- | ||
``` | ||
python3 setup.py sdist | ||
python3 -m twine upload dist/* --verbose | ||
``` | ||
</details> | ||
License | ||
======= | ||
MIT License | ||
Copyright (c) 2024 Photoroom | ||
Permission is hereby granted, free of charge, to any person obtaining a copy | ||
of this software and associated documentation files (the "Software"), to deal | ||
in the Software without restriction, including without limitation the rights | ||
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | ||
copies of the Software, and to permit persons to whom the Software is | ||
furnished to do so, subject to the following conditions: | ||
The above copyright notice and this permission notice shall be included in all | ||
copies or substantial portions of the Software. | ||
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | ||
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
SOFTWARE. |
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#!/usr/bin/zsh | ||
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echo "Updating the datago binaries" | ||
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# Get the current python version | ||
python_version=$(python3 --version 2>&1 | awk '{print $2}' | cut -d. -f1,2) | ||
echo "Building package for python" $python_version | ||
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# Setup where the python package will be copied | ||
DESTINATION="../../../python_$python_version" | ||
rm -rf $DESTINATION | ||
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# Build the python package via the gopy toolchain | ||
cd src/pkg/client | ||
gopy pkg -author="Photoroom" -email="[email protected]" -url="" -name="datago" -version="0.3" . | ||
mkdir -p $DESTINATION/datago | ||
mv datago/* $DESTINATION/datago/. | ||
mv setup.py $DESTINATION/. | ||
mv Makefile $DESTINATION/. | ||
mv README.md $DESTINATION/. | ||
rm LICENSE | ||
rm MANIFEST.in | ||
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cd ../../.. | ||
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[project] | ||
name = "datago_blefaudeux" | ||
version = "0.0.1" | ||
authors = [ | ||
{ name="Photoroom", email="[email protected]" }, | ||
] | ||
description = "A high performance python module to access data ressources through HTTP, written in Golang" | ||
readme = "README.md" | ||
requires-python = "==3.11" | ||
classifiers = [ | ||
"Programming Language :: Python :: 3", | ||
"License :: OSI Approved :: MIT License", | ||
"Operating System :: OS Independent", | ||
] | ||
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[project.urls] | ||
Homepage = "https://github.com/photoroom/datago" | ||
Issues = "https://github.com/photoroom/datago/issues" |
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from datago import datago # type: ignore | ||
import time | ||
import typer | ||
from tqdm import tqdm | ||
import numpy as np | ||
from polyglot import go_array_to_pil_image, go_array_to_numpy | ||
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def benchmark( | ||
source: str = typer.Option("SOURCE", help="The source to test out"), | ||
limit: int = typer.Option(2000, help="The number of samples to test on"), | ||
crop_and_resize: bool = typer.Option(True, help="Crop and resize the images on the fly"), | ||
require_images: bool = typer.Option(True, help="Request the original images"), | ||
require_embeddings: bool = typer.Option(False, help="Request embeddings"), | ||
test_masks: bool = typer.Option(True, help="Test masks"), | ||
test_latents: bool = typer.Option(True, help="Test latents"), | ||
): | ||
print(f"Running benchmark for {source} - {limit} samples") | ||
client = datago.GetClient( | ||
source=source, | ||
require_images=require_images, | ||
require_embeddings=require_embeddings, | ||
has_attributes="", | ||
lacks_attributes="", | ||
has_masks="segmentation_mask" if test_masks else "", | ||
lacks_masks="", | ||
has_latents="masked_image,my_test_latents" if test_latents else "", | ||
lacks_latents="", | ||
crop_and_resize=crop_and_resize, | ||
prefetch_buffer_size=256, | ||
samples_buffer_size=256, | ||
downloads_concurrency=64, | ||
) | ||
client.Start() | ||
start = time.time() | ||
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# Make sure in the following that we compare apples to apples, meaning in that case | ||
# that we materialize the payloads in the python scope in the expected format | ||
# (PIL.Image for images and masks for instance, numpy arrays for latents) | ||
img, mask, masked_image = None, None, None | ||
for _ in tqdm(range(limit), dynamic_ncols=True): | ||
sample = client.GetSample() | ||
if sample.ID: | ||
# Bring the masks and image to PIL | ||
if hasattr(sample, "Image"): | ||
img = go_array_to_pil_image(sample.Image) | ||
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if hasattr(sample, "Masks"): | ||
for _, mask_buffer in sample.Masks.items(): | ||
mask = go_array_to_pil_image(mask_buffer) | ||
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if hasattr(sample, "AdditionalImages") and "masked_image" in sample.AdditionalImages: | ||
masked_image = go_array_to_pil_image(sample.AdditionalImages["masked_image"]) | ||
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# Bring the latents to numpy | ||
if hasattr(sample, "Latents"): | ||
for _, latent_buffer in sample.Latents.items(): | ||
_latents = go_array_to_numpy(latent_buffer) | ||
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# Bring the embeddings to numpy | ||
if hasattr(sample, "CocaEmbedding"): | ||
_embedding = np.array(sample.CocaEmbedding) | ||
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fps = limit / (time.time() - start) | ||
print(f"FPS {fps:.2f}") | ||
client.Stop() | ||
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# Save the last image as a test | ||
if img is not None: | ||
img.save("benchmark_last_image.png") | ||
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if mask is not None: | ||
mask.save("benchmark_last_mask.png") | ||
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if masked_image is not None: | ||
masked_image.save("benchmark_last_masked_image.png") | ||
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if __name__ == "__main__": | ||
typer.run(benchmark) |
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