pySankey

Uses matplotlib to create simple Sankey diagrams flowing only from left to right.

Example

With fruits.txt :

	true	predicted
0	blueberry	orange
1	lime	orange
2	blueberry	lime
3	apple	orange
...	...	...
996	lime	orange
997	blueberry	orange
998	orange	banana
999	apple	lime

1000 rows × 2 columns

You can generate a sankey's diagram with this code:

import pandas as pd
from pysankey import sankey
import matplotlib.pyplot as plt

df = pd.read_csv(
    'pysankey/fruits.txt', sep=' ', names=['true', 'predicted']
)
colorDict = {
    'apple':'#f71b1b',
    'blueberry':'#1b7ef7',
    'banana':'#f3f71b',
    'lime':'#12e23f',
    'orange':'#f78c1b',
    'kiwi':'#9BD937'
}

ax = sankey(
    df['true'], df['predicted'], aspect=20, colorDict=colorDict,
    leftLabels=['banana','orange','blueberry','apple','lime'],
    rightLabels=['orange','banana','blueberry','apple','lime','kiwi'],
    fontsize=12
)
plt.show() # to display
plt.savefig('fruit.png', bbox_inches='tight') # to save

You could also use weight:

,customer,good,revenue
0,John,fruit,5.5
1,Mike,meat,11.0
2,Betty,drinks,7.0
3,Ben,fruit,4.0
4,Betty,bread,2.0
5,John,bread,2.5
6,John,drinks,8.0
7,Ben,bread,2.0
8,Mike,bread,3.5
9,John,meat,13.0

import pandas as pd
from pysankey import sankey
import matplotlib.pyplot as plt

df = pd.read_csv(
    'pysankey/customers-goods.csv', sep=',',
    names=['id', 'customer', 'good', 'revenue']
)
weight = df['revenue'].values[1:].astype(float)

ax = sankey(
      left=df['customer'].values[1:], right=df['good'].values[1:],
      rightWeight=weight, leftWeight=weight, aspect=20, fontsize=20
)
plt.show() # to display
plt.savefig('customers-goods.png', bbox_inches='tight') # to save

Similar to seaborn, you can pass a matplotlib Axes to sankey function:

import pandas as pd
from pysankey import sankey
import matplotlib.pyplot as plt

df = pd.read_csv(
        'pysankey/fruits.txt',
        sep=' ', names=['true', 'predicted']
)
colorDict = {
    'apple': '#f71b1b',
    'blueberry': '#1b7ef7',
    'banana': '#f3f71b',
    'lime': '#12e23f',
    'orange': '#f78c1b'
}

ax1 = plt.axes()

sankey(
      df['true'], df['predicted'], aspect=20, colorDict=colorDict,
      fontsize=12, ax=ax1
)

plt.show()

Important informations

Use of figureName, closePlot, figSize in sankey() is deprecated and will be remove in a future version. This is done so matplotlib is used more transparently as this issue on the original github repo suggested.

Now, sankey does less of the customization and let the user do it to their liking by returning a matplotlib Axes object, which mean the user also has access to the Figure to customise. Then they can choose what to do with it - showing it, saving it with much more flexibility.

Recommended changes to your code

• To save a figure, one can simply do:

  plt.savefig("<figureName>.png", bbox_inches="tight", dpi=150)

• The closePlot is not needed anymore because without plt.show() after sankey(), no plot is displayed. You can still do plt.close() to be sure to not display this plot if you display other plots afterwards.

• You can modify the sankey size by changing the one from the matplotlib figure.

    plt.gcf().set_size_inches(figSize)

Package development

pip3 install -e ".[test]"

Lint

pylint pysankey

Testing

python -m unittest

Coverage

coverage run -m unittest
coverage html
# Open htmlcov/index.html in a navigator