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deploy: 4d2dbc2
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jthielen committed Jun 14, 2024
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1,708 changes: 1,708 additions & 0 deletions _images/c-grid_example.svg
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7 changes: 5 additions & 2 deletions _sources/notebooks/intro/crash_course.ipynb
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Expand Up @@ -259,9 +259,11 @@
" - w (i, k +/- 1/2)\n",
"<br>\n",
"\n",
"<i>TODO: Place Grid Visual Aid Here</i>\n",
"<img src=\"../images/c-grid_example.svg\" width=500 alt=\"Visualization of the staggered offsets of a C grid. u momentum points exist to the left and right of the mass points, and w momentum points to the top and bottom.\"></img>\n",
"\n",
"<br>\n",
"\n",
"\n",
"Boundary Conditions\n",
"- Free-Slip Lower\n",
"- Rigid Top \n",
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"cell_type": "markdown",
"metadata": {},
"source": [
"TODO: add holoviews visualization of \"what's going wrong\""
"TODO: add holoviews visualization of \"what's going wrong\"\n",
"\n"
]
},
{
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4 changes: 2 additions & 2 deletions notebooks/config/boundary_conditions.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-42454dc4-2b1f-4fc9-a66f-1ebfa68237cb">
<span class="eqno">(8)<a class="headerlink" href="#equation-42454dc4-2b1f-4fc9-a66f-1ebfa68237cb" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-45f01805-e613-4203-b7a2-ba07212dc13e">
<span class="eqno">(8)<a class="headerlink" href="#equation-45f01805-e613-4203-b7a2-ba07212dc13e" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/config/geospatial_coordinates.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-55d2e6f7-8158-455e-9d34-cdc173c1101e">
<span class="eqno">(5)<a class="headerlink" href="#equation-55d2e6f7-8158-455e-9d34-cdc173c1101e" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-c512307e-4bfb-4774-b6c9-b8f1b54ebcd8">
<span class="eqno">(5)<a class="headerlink" href="#equation-c512307e-4bfb-4774-b6c9-b8f1b54ebcd8" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/config/grid_staggering.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-4f0267c3-6b5f-45d4-a454-28716266ef83">
<span class="eqno">(6)<a class="headerlink" href="#equation-4f0267c3-6b5f-45d4-a454-28716266ef83" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-60b965cb-17d8-475f-b6b3-c92aef6c973d">
<span class="eqno">(6)<a class="headerlink" href="#equation-60b965cb-17d8-475f-b6b3-c92aef6c973d" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/config/vertical_coordinates.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-ac90b889-38e3-4fa9-996f-068074d5efcf">
<span class="eqno">(7)<a class="headerlink" href="#equation-ac90b889-38e3-4fa9-996f-068074d5efcf" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-fc8054a6-fbe5-4ed3-85a9-649bed1c928a">
<span class="eqno">(7)<a class="headerlink" href="#equation-fc8054a6-fbe5-4ed3-85a9-649bed1c928a" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/dynamics/linear_model.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-23f202aa-e406-4b22-9423-18a7c2b33476">
<span class="eqno">(1)<a class="headerlink" href="#equation-23f202aa-e406-4b22-9423-18a7c2b33476" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-6e28f330-e6d4-41d2-a495-0b6aba4e95a0">
<span class="eqno">(1)<a class="headerlink" href="#equation-6e28f330-e6d4-41d2-a495-0b6aba4e95a0" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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6 changes: 3 additions & 3 deletions notebooks/intro/crash_course.html
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Expand Up @@ -656,8 +656,8 @@ <h2>Model Configuration<a class="headerlink" href="#model-configuration" title="
</ul>
</li>
</ul>
<p><i>TODO: Place Grid Visual Aid Here</i>
<br></p>
<p><a class="reference internal" href="../../_images/c-grid_example.svg"><img alt="Visualization of the staggered offsets of a C grid. u momentum points exist to the left and right of the mass points, and w momentum points to the top and bottom." src="../../_images/c-grid_example.svg" width="500" /></a></img></p>
<br>
<p>Boundary Conditions</p>
<ul class="simple">
<li><p>Free-Slip Lower</p></li>
Expand Down Expand Up @@ -1037,7 +1037,7 @@ <h3>Setup<a class="headerlink" href="#setup" title="Link to this heading"><i cla
</div>
</div>
<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;matplotlib.image.AxesImage at 0x7ffa8a86df60&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;matplotlib.image.AxesImage at 0x7fbf46041a80&gt;
</pre></div>
</div>
<img alt="../../_images/98259e04708f7e454f5bab33bf35cd0110cecfaa3dfb9bcabbb6f23967968dc8.png" src="../../_images/98259e04708f7e454f5bab33bf35cd0110cecfaa3dfb9bcabbb6f23967968dc8.png" />
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4 changes: 2 additions & 2 deletions notebooks/notebook-template.html
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Expand Up @@ -546,8 +546,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-d9fc2ce3-888e-4174-8984-c819d0b38733">
<span class="eqno">()<a class="headerlink" href="#equation-d9fc2ce3-888e-4174-8984-c819d0b38733" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-ac449069-b489-4f26-8f2c-24ba32841144">
<span class="eqno">()<a class="headerlink" href="#equation-ac449069-b489-4f26-8f2c-24ba32841144" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/numerics/corrections_filtering.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-5c934548-3dac-4c85-ad14-d8f032e1a387">
<span class="eqno">(4)<a class="headerlink" href="#equation-5c934548-3dac-4c85-ad14-d8f032e1a387" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-b08647b8-6995-49cd-8f98-8cfc598852f7">
<span class="eqno">(4)<a class="headerlink" href="#equation-b08647b8-6995-49cd-8f98-8cfc598852f7" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
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4 changes: 2 additions & 2 deletions notebooks/numerics/stability_analysis.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-1adc25c6-9ab9-4036-9545-192589783fa5">
<span class="eqno">(3)<a class="headerlink" href="#equation-1adc25c6-9ab9-4036-9545-192589783fa5" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-2c92e4ae-adf2-4a14-9204-157355b9d09c">
<span class="eqno">(3)<a class="headerlink" href="#equation-2c92e4ae-adf2-4a14-9204-157355b9d09c" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
Expand Down
4 changes: 2 additions & 2 deletions notebooks/numerics/time_integration.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-43e1a374-90c8-4ccd-9f8c-3f28cd1bfe1a">
<span class="eqno">(2)<a class="headerlink" href="#equation-43e1a374-90c8-4ccd-9f8c-3f28cd1bfe1a" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-2984d128-9fab-4ca4-979b-299091b9e68c">
<span class="eqno">(2)<a class="headerlink" href="#equation-2984d128-9fab-4ca4-979b-299091b9e68c" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
Expand Down
4 changes: 2 additions & 2 deletions notebooks/summary/comparison.html
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Expand Up @@ -544,8 +544,8 @@ <h5>of further and further<a class="headerlink" href="#of-further-and-further" t
<section id="header-levels">
<h6>header levels<a class="headerlink" href="#header-levels" title="Link to this heading"><i class="fas fa-link"></i></a></h6>
<p>as well <span class="math notranslate nohighlight">\(m = a * t / h\)</span> text! Similarly, you have access to other <span class="math notranslate nohighlight">\(\LaTeX\)</span> equation <a class="reference external" href="https://jupyter-notebook.readthedocs.io/en/stable/examples/Notebook/Typesetting%20Equations.html"><strong>functionality</strong></a> via MathJax (demo below from link),</p>
<div class="amsmath math notranslate nohighlight" id="equation-59804937-3e46-441d-ae4e-997f6374cf20">
<span class="eqno">(9)<a class="headerlink" href="#equation-59804937-3e46-441d-ae4e-997f6374cf20" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
<div class="amsmath math notranslate nohighlight" id="equation-0b07c903-16c1-4f7b-b3e9-629a8352fc63">
<span class="eqno">(9)<a class="headerlink" href="#equation-0b07c903-16c1-4f7b-b3e9-629a8352fc63" title="Permalink to this equation"><i class="fas fa-link"></i></a></span>\[\begin{align}
\dot{x} &amp; = \sigma(y-x) \\
\dot{y} &amp; = \rho x - y - xz \\
\dot{z} &amp; = -\beta z + xy
Expand Down
2 changes: 1 addition & 1 deletion searchindex.js
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