A C# implementation of the Bullseye algorithm for shotgun mass spectrometry data analysis. With ProteoWizard file support.
BullseyeSharp requires ProteoWizard to function.
NOTE this is a fork of the project for use with Skyline. The .csproj file that Skyline actually uses for BullseyeSharp is located in pwiz_tools\Skyline\BullseyeSharp - I wanted to minimize changes to the forked files.