101 fix mature protein idea from max and implement start and end clean #146
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
haeussma
requested changes
Mar 20, 2025
| @@ -23,6 +24,8 @@ def get_sequence_data( | |||
| sequence_id2: Second sequence accession ID | |||
There was a problem hiding this comment.
Docstring and function args description seems to be incorrect
| else: | ||
| sequences = {result["id"]: result["sequence"] for result in results} | ||
| positions = {result["id"]: result["positions"] for result in results} | ||
| return sequences, positions | ||
|
|
||
| def find_mutations( |
There was a problem hiding this comment.
According to docstring rather call it save_mutations
| db, | ||
| standard_numbering_tool_name, | ||
| node_type, | ||
| region_ids_neo4j, | ||
| ) | ||
|
|
||
| if debug: |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
No description provided.