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Add attribute_source to all KG2 node/edge attributes
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amykglen committed Oct 11, 2024
1 parent 442f8ca commit 9d689ab
Showing 1 changed file with 16 additions and 8 deletions.
24 changes: 16 additions & 8 deletions app/config_kg2c.json
Original file line number Diff line number Diff line change
Expand Up @@ -30,38 +30,46 @@
},
"iri": {
"attribute_type_id": "biolink:IriType",
"value_type_id": "metatype:Uri"
"value_type_id": "metatype:Uri",
"attribute_source": "{kp_infores_curie}"
},
"description": {
"attribute_type_id": "biolink:description",
"value_type_id": "metatype:String"
"value_type_id": "metatype:String",
"attribute_source": "{kp_infores_curie}"
},
"all_categories": {
"attribute_type_id": "biolink:category",
"value_type_id": "metatype:Uriorcurie",
"description": "Categories of all nodes in this synonym set in RTX-KG2."
"description": "Categories of all nodes in this synonym set in RTX-KG2.",
"attribute_source": "{kp_infores_curie}"
},
"all_names": {
"attribute_type_id": "biolink:synonym",
"value_type_id": "metatype:String",
"description": "Names of all nodes in this synonym set in RTX-KG2."
"description": "Names of all nodes in this synonym set in RTX-KG2.",
"attribute_source": "{kp_infores_curie}"
},
"equivalent_curies": {
"attribute_type_id": "biolink:xref",
"value_type_id": "metatype:Nodeidentifier",
"description": "Identifiers of all nodes in this synonym set in RTX-KG2."
"description": "Identifiers of all nodes in this synonym set in RTX-KG2.",
"attribute_source": "{kp_infores_curie}"
},
"publications": {
"attribute_type_id": "biolink:publications",
"value_type_id": "biolink:Uriorcurie"
"value_type_id": "biolink:Uriorcurie",
"attribute_source": "{kp_infores_curie}"
},
"kg2_ids": {
"attribute_type_id": "biolink:original_predicate",
"value_type_id": "metatype:String",
"description": "The IDs of the original RTX-KG2pre edge(s) corresponding to this edge prior to any synonymization or remapping."
"description": "The IDs of the original RTX-KG2pre edge(s) corresponding to this edge prior to any synonymization or remapping.",
"attribute_source": "{kp_infores_curie}"
},
"publications_info": {
"attribute_type_id": "bts:sentence"
"attribute_type_id": "bts:sentence",
"attribute_source": "{kp_infores_curie}"
}
},
"sources_template": {}
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