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Updated Yeast Project #4

Merged
merged 8 commits into from
Jan 31, 2025
Merged

Updated Yeast Project #4

merged 8 commits into from
Jan 31, 2025

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D3xtersLab
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Updated Readme file with file run order, more details and environment setup. Create raw & processed data folders. Added my SPRAS config file and saved conda environment and required packages as a yaml file.

D3xtersLab and others added 3 commits July 26, 2024 13:00
Updated README to indicate run order for the files, created raw & processed data folders, added my SPRAS config file and created yaml file for my conda environment with required packages
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@agitter agitter left a comment

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This pull request follows up on #1. Let's continue to modify these files in this pull request instead of creating a new one with updates.

I can clarify any of these comments that are confusing.

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It looks like most of the initial review comments have been addressed. A few remaining things I noticed are:

  • the version of matplotlib_venn so we can add it to the environment file
  • a Raw_data section in the readme with links to the original file sources
  • include the dummy file in Raw_data

There could be other small things I missed.

Added Raw_Data files & links to README, Updated environment file with just the packages required, tested the environment recreation, added more to README file
@agitter agitter merged commit c60056d into Reed-CompBio:main Jan 31, 2025
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2 participants