speed up some tests or functions

Remi-Gau · Aug 17, 2023 · 6bd1277 · 6bd1277
1 parent fb2afec
commit 6bd1277
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Showing 3 changed files with 12 additions and 9 deletions.
diff --git a/+bids/+util/create_sessions_tsv.m b/+bids/+util/create_sessions_tsv.m
@@ -49,7 +49,8 @@
   %%
   output_filenames = {};
 
-  layout = bids.layout(layout_or_path, 'use_schema', use_schema);
+  layout = bids.layout(layout_or_path, 'use_schema', use_schema, ...
+                       'index_dependencies', false);
 
   sessions_list = bids.query(layout, 'sessions');
   if isempty(sessions_list) && use_schema

diff --git a/tests/tests_private/test_list_events.m b/tests/tests_private/test_list_events.m
@@ -14,19 +14,17 @@ function test_list_events_basic()
 
   pth_bids_example = get_test_data_dir();
 
-  data_sets_to_test = '^ds00.*[0-9]$'; % '^ds.*[0-9]$'
+  data_sets_to_test = '^ds00[0-9]$'; % '^ds.*[0-9]$'
   examples = bids.internal.file_utils('FPList', get_test_data_dir(), 'dir', data_sets_to_test);
 
   for i = 1:size(examples, 1)
 
-    BIDS = bids.layout(deblank(examples(i, :)));
+    BIDS = bids.layout(deblank(examples(i, :)), 'index_dependencies', false);
 
     tasks = bids.query(BIDS, 'tasks');
 
     for j = 1:numel(tasks)
 
-      [bids.internal.file_utils(BIDS.pth, 'basename'), ' - ', tasks{j}];
-
       [data, headers, y_labels] = bids.internal.list_events(BIDS, 'func', tasks{j});
 
       bids.internal.plot_diagnostic_table(data, ...

diff --git a/tests/tests_utils/test_create_data_dict.m b/tests/tests_utils/test_create_data_dict.m
@@ -10,7 +10,8 @@ function test_create_data_dict_basic()
 
   pth_bids_example = get_test_data_dir();
 
-  BIDS = bids.layout(fullfile(pth_bids_example, 'ds001'));
+  BIDS = bids.layout(fullfile(pth_bids_example, 'ds001'), ...
+                     'index_dependencies', false);
 
   tsv_files = bids.query(BIDS, 'data', ...
                          'sub', '01', ...
@@ -48,7 +49,8 @@ function test_create_data_dict_schema()
 
   pth_bids_example = get_test_data_dir();
 
-  BIDS = bids.layout(fullfile(pth_bids_example, 'ds001'));
+  BIDS = bids.layout(fullfile(pth_bids_example, 'ds001'), ...
+                     'index_dependencies', false);
 
   tsv_files = bids.query(BIDS, 'data', ...
                          'suffix', 'events');
@@ -76,7 +78,8 @@ function test_create_data_dict_schema()
 
   pth_bids_example = get_test_data_dir();
 
-  BIDS = bids.layout(fullfile(pth_bids_example, dataset));
+  BIDS = bids.layout(fullfile(pth_bids_example, dataset), ...
+                     'index_dependencies', false);
 
   tasks =  bids.query(BIDS, 'tasks');
 
@@ -154,7 +157,8 @@ function test_create_data_dict_several_tsv()
 
     dataset = datasets{i_dataset};
 
-    BIDS = bids.layout(fullfile(pth_bids_example, dataset));
+    BIDS = bids.layout(fullfile(pth_bids_example, dataset), ...
+                       'index_dependencies', false);
 
     tasks =  bids.query(BIDS, 'tasks');