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Add oblique angle#57

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RevathiJambunathan wants to merge 157 commits intoPulsar_DevelopmentRevathiJambunathan/WarpX:Pulsar_Developmentfrom AddObliqueAngleRevathiJambunathan/WarpX:AddObliqueAngleCopy head branch name to clipboard

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Commits on Jan 14, 2020

• adding pulsar as a compiler option

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  52ced49

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Commits on Jan 15, 2020

• Adding pulsar input and reading pulsar parameters using Don's PR

  RevathiJambunathan

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• adding input file for pulsar

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  2d58835

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• Merge branch 'dev' of https://github.com/ECP-WarpX/WarpX into InjectParticlesInSpheroid

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• whitespace style fix

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• moved vis from pulsar file to tools

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  e2bf5fd

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• scaling notebook to detemine inputs for pulsar

  RevathiJambunathan

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  86b84a9

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• removing unwanted file

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  51e5f4b

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• Merge branch 'dev' of https://github.com/ECP-WarpX/WarpX into PulsarBranch

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• Merge branch 'ParticlesEBParser' of https://github.com/RevathiJambunathan/WarpX into PulsarBranch

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Commits on Jan 17, 2020

• Merge branch 'ParticlesEBParser' of https://github.com/RevathiJambunathan/WarpX into InjectParticlesInSpheroid

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• Merge branch 'dev' of https://github.com/ECP-WarpX/WarpX into InjectParticlesInSpheroid

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• added external E and B fields and the appropriate input parameters

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• EOL whitespace

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• Merge branch 'dev' of https://github.com/ECP-WarpX/WarpX into PulsarBranch

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• Merge branch 'PulsarBranch' of https://github.com/RevathiJambunathan/WarpX into pulsarinput_field

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• seeting up bounds for pulsar surface

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Commits on Jan 18, 2020

• pushing changes for comparison

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Commits on Jan 21, 2020

• particles injected below surface, dipole magnetic field inside and outside, momentum of all particles is zero, fixed function that applied vacuum EB fields on particles

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Commits on Jan 22, 2020

• making changes suggested in the review

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  36552f2

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• merging with upstream dev

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  ac7d1ab

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• merging with dev and fixing conflicts

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  52b327d

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• Merge branch 'PulsarBranch' of https://github.com/RevathiJambunathan/WarpX into pulsarinput_field

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  bf3e2bd

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• removing unwanted commented out lines

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• removing EOL whitespace

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  9f134a0

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• Merge pull request #3 from RevathiJambunathan/pulsarinput_field

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• add particles based on analytical surface charge density

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  56db49f

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Commits on Jan 23, 2020

• using local Er and Er_cor to compute particle introduction

  RevathiJambunathan

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  90e62dd

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• fixing particle injection with local Er that includes Er_external

  RevathiJambunathan

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  e8a638a

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• changes to pulsar

  RevathiJambunathan

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  7bebeb7

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• michel and li efields inside and outside star. Particle injection rho_GJ

  RevathiJambunathan

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  10e559d

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• fixing conlficts with PulsarBranch

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  82b4a30

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• cleaning

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  4c0b091

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Commits on Jan 24, 2020

• adding input parameters to toggle rho gj scaling, ninjection, maxden

  RevathiJambunathan

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  6ecd29a

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• removing unwanted insidePulsarBound function

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  a3f323e

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• Merge pull request #5 from RevathiJambunathan/InjectParticlesInSpheroid

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  dwillcox

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• Turn on inputs parameter to damp internal E-field for the pulsar setup.

  dwillcox

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  dwillcox

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  dwillcox

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  dwillcox

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• Add comments to distinguish different kinds of momentum injections. Add input parameter for the timescale for ramping up omega.

  dwillcox

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  7449928

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

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• Add scale factor for damping internal E-field to the inputs file.

  dwillcox

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• Add a python script for making plots and a gif from a set of plotfiles.

  dwillcox

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• Remove PulsarEBField from PulsarParameters.cpp after a rebase mistake.

  dwillcox

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• Default the momentum initialization to 0.

  dwillcox

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• Swap tabs for spaces.

  dwillcox

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• Ran the style commands suggested by Travis CI to remove trailing whitespace.

  dwillcox

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• Rename pulsar analysis scripts to make the WarpX style checker happy.

  dwillcox

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  4dc6357

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• Merge pull request #6 from dwillcox/damp_Efield_rebased

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• fixing an error in rho_GJ calculation

  RevathiJambunathan

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  2dd3d74

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Commits on Mar 10, 2020

• merged upstream master branch and fixed conflicts

  RevathiJambunathan

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  b56e67f

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• Upsating GetPosition() based on recent changes in master branch

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Commits on Mar 13, 2020

• Merge pull request #7 from RevathiJambunathan/MergingMasterIntoPulsarBranch_10March

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  dwillcox

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• Damp electric fields internal to the pulsar when compiling with PULSAR on.

  dwillcox

  committed
  bad249e

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• Separate out cartesian ijk -> spherical radius into a utility function so it can be used elsewhere.

  dwillcox

  committed
  36dcd2f

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• Rename damping function, damp in domain [0, R_star-dR_star]. Normalize argument to tanh in damping formula.

  dwillcox

  committed
  84dd785

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• Add PulsarParm::Omega(t) function that returns omega(t) depending on ramp_omega_time input parameter. If ramp_omega_time < 0, PulsarParm::Omega(t) = omega_star.

  dwillcox

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  a10599b

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• Change form of damping function to tanh(damping_scale * (r/R_star-1)) + 1 so the damping factor at r=R_star is 1.0. Add pulsar.damping_scale as an input parameter defaulted to a reasonable value of…

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  dwillcox

  committed
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• Add a python script for making plots and a gif from a set of plotfiles.

  dwillcox

  committed
  6f8fe5a

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• Undo line removal.

  dwillcox

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• Undo removal of newline.

  dwillcox

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Commits on Mar 27, 2020

• Merge pull request #4 from dwillcox/damp_internal_Efield

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Commits on Jun 25, 2020

• fixing conflicts after merging with WarpX/development

  RevathiJambunathan

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  52d9fed

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• fix compilation error

  RevathiJambunathan

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  46c2856

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• some more compilation error

  RevathiJambunathan

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  810c2f8

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• Calling External E and B for pulsar from GetExternal functions

  RevathiJambunathan

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  5d6e216

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Commits on Jul 9, 2020

• a few fixes in the getexternalEB and addplasma to ensure test works

  RevathiJambunathan

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  9dad457

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• include staggering

  RevathiJambunathan

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  ac15f36

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• damp b field and include staggering. fix compilation errors

  RevathiJambunathan

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  6a48c94

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Commits on Jul 15, 2020

• merging with development and fixing conflicts in AddPlasma

  RevathiJambunathan

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  6c14fc7

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• Merge branch 'development' of https://github.com/ECP-WarpX/WarpX into original_PulsarBranch

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Commits on Jul 23, 2020

• fixed Ecell

  RevathiJambunathan

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  9946626

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• Merge branch 'development' of https://github.com/ECP-WarpX/WarpX into original_PulsarBranch

  RevathiJambunathan

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  70a497a

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• removing particles if inside R_Star

  RevathiJambunathan

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  f0f4de0

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• recent input file

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  2756eb8

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• eol fix

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Commits on Jul 30, 2020

• fix merge conflict after merge with development

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Commits on Oct 16, 2020

• fix conflict

  RevathiJambunathan

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  ca2a20c

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• Add functor for pulsar particle injection

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  2579dd7

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• fix eol

  RevathiJambunathan

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  c1a2c37

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• Add Functor file

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  cba43b2

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• fix eol

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  0f8ab60

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• add updated input file

  RevathiJambunathan

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  f722ea2

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• push external-EB-on-grid to debug. particle injection off.

  RevathiJambunathan

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  28f554a

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• inject fixed number of particles when injection is on

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  185bfee

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• adding file with external EM field on grid

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  76ce2ca

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• fix indent

  RevathiJambunathan

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  d1fc5b0

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• fixing for loop to include last dimension

  RevathiJambunathan

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  9ab0419

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• add notebook with scaling

  RevathiJambunathan

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  d8e4b2f

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• uncomment DampFields for E and B

  RevathiJambunathan

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  c1ca960

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• fixing E-corotating insdie. E-quad outside. B-dipole everywhere

  RevathiJambunathan

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  cdd4244

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• gather external pulsar fields, add num_ppc particles, damp Maxwell fields inside pulsar

  RevathiJambunathan

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  82059a3

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• include particles only outside r_star

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  0e56778

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• fix EOL

  RevathiJambunathan

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  74b4efb

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• particle injection inner ring and particle removal in same location

  RevathiJambunathan

  committed
  7c05c16

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• damp EB fields inside R_Star, intro and remove part inside R_star

  RevathiJambunathan

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  4894d01

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• fix typo in cell cell z coordinate

  RevathiJambunathan

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  f6d871f

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• add fraction of particles through pcounts of cell.

  RevathiJambunathan

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  4e43c60

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• Revert "add fraction of particles through pcounts of cell."

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• ensuring that fractional particle injection is uniform in cell

  RevathiJambunathan

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  3def6ef

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• we dont need the p.id=-1 to remove particles 1-fractional part injection

  RevathiJambunathan

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  23eb044

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• updated input file

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Commits on Oct 17, 2020

• terminate ifdef PULSAR

  RevathiJambunathan

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  3fefb74

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• remove unnecessary call to add external EB on EB Multifab. we call it directly in Fieldgather instead

  RevathiJambunathan

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  3e48944

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• clean commented out lines in GetExternalFields

  RevathiJambunathan

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  a327fb3

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• remove commented out code and old unused PulsarEField and PulsarBField

  RevathiJambunathan

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  33ed47d

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• remove unused function init

  RevathiJambunathan

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  a117c43

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Commits on Oct 22, 2020

• removing AddPulsarPlasma functor which is not used

  RevathiJambunathan

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  f8a6e90

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• remove commented out code and calls to add plasma functor

  RevathiJambunathan

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  dde5752

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• add obliquity for pulsar, Chi, to be parsed in degree.

  RevathiJambunathan

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• add Chi option in input file

  RevathiJambunathan

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• add spaces between operators

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Commits on Oct 28, 2020

• fix conflict with WarpX

  RevathiJambunathan

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  d857b33

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• Add functor for pulsar particle injection

  RevathiJambunathan

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  cd04809

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• fix eol

  RevathiJambunathan

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  f4d3e0e

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• Add Functor file

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  c6a0acb

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• fix eol

  RevathiJambunathan

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  c045d2e

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• add updated input file

  RevathiJambunathan

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  d5aa0ae

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• push external-EB-on-grid to debug. particle injection off.

  RevathiJambunathan

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  d45dc0a

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• inject fixed number of particles when injection is on

  RevathiJambunathan

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  c82b83c

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• adding file with external EM field on grid

  RevathiJambunathan

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  b447a5c

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• fix indent

  RevathiJambunathan

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  fea5a5b

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• fixing for loop to include last dimension

  RevathiJambunathan

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  9c3784c

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• add notebook with scaling

  RevathiJambunathan

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  a606725

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• uncomment DampFields for E and B

  RevathiJambunathan

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  8be9907

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• fixing E-corotating insdie. E-quad outside. B-dipole everywhere

  RevathiJambunathan

  committed
  b89a289

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• gather external pulsar fields, add num_ppc particles, damp Maxwell fields inside pulsar

  RevathiJambunathan

  committed
  a2f145e

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• include particles only outside r_star

  RevathiJambunathan

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  9fbcd4e

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• fix EOL

  RevathiJambunathan

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  062b0d6

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• particle injection inner ring and particle removal in same location

  RevathiJambunathan

  committed
  b847c30

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• damp EB fields inside R_Star, intro and remove part inside R_star

  RevathiJambunathan

  committed
  609cc5e

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• fix typo in cell cell z coordinate

  RevathiJambunathan

  committed
  8bd533e

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• add fraction of particles through pcounts of cell.

  RevathiJambunathan

  committed
  f3b81e2

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• Revert "add fraction of particles through pcounts of cell."

  Show description for e52d67b
  RevathiJambunathan

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  e52d67b

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• ensuring that fractional particle injection is uniform in cell

  RevathiJambunathan

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  7608182

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• we dont need the p.id=-1 to remove particles 1-fractional part injection

  RevathiJambunathan

  committed
  b544279

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• updated input file

  RevathiJambunathan

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  cd821dc

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• terminate ifdef PULSAR

  RevathiJambunathan

  committed
  203ebfb

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• remove unnecessary call to add external EB on EB Multifab. we call it directly in Fieldgather instead

  RevathiJambunathan

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  dc8ed54

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• clean commented out lines in GetExternalFields

  RevathiJambunathan

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  446ddeb

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• remove commented out code and old unused PulsarEField and PulsarBField

  RevathiJambunathan

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  7bb1e45

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• remove unused function init

  RevathiJambunathan

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  7b7495b

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• removing AddPulsarPlasma functor which is not used

  RevathiJambunathan

  committed
  75d5d86

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• remove commented out code and calls to add plasma functor

  RevathiJambunathan

  committed
  8e784b3

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• adding missing ;

  RevathiJambunathan

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  b2e28b9

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Commits on Oct 30, 2020

• FillBoundary for EB after dampingEB

  

  Revathi Jambunathan

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Commits on Nov 1, 2020

• using gpuarray for staggering used to damp EB fields

  RevathiJambunathan

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Commits on Nov 5, 2020

• default values in fieldgather doShapeN for problo, probhi, and cur_time

  RevathiJambunathan

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• empty array

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• pass by reference

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Commits on Nov 11, 2020

• merge with addExternalEB

  RevathiJambunathan

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  3b0f7e1

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• fix conflict

  RevathiJambunathan

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  25ff086

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Commits on Nov 14, 2020

• Adding cosChi to monopole term in Er

  RevathiJambunathan

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Commits on Nov 16, 2020

• corotating Efield inside Rstar where particles are introduced. This works with sigma introduced within one dkindepth

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Commits on Dec 11, 2020

• fix conflict and add cmake for pulsar

  

  Revathi Jambunathan

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