Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Tnscope problem with the insertion AF and AD calcuation #67

Open
sailepradh opened this issue May 22, 2024 · 0 comments
Open

Tnscope problem with the insertion AF and AD calcuation #67

sailepradh opened this issue May 22, 2024 · 0 comments
Assignees
@sailepradh
Labels
bug Something isn't working

Comments

@sailepradh
Copy link
Contributor

Problem : In one of the paired normal analysis in MGP sample, clinically relevant FLT-ITD variant are missed in the analysis.

Insertion called from the tnscope have incorrectly calcuated the AF and AD which has caused to tagged the variant to be on further filtration of the vcf and incorrectly assigned "FAIL_NVAF" in clinically relevant variant from FLT3-internal tandem duplication and overall have caused the event to be missed from the presentation.
@sailepradh sailepradh self-assigned this May 22, 2024
@sailepradh sailepradh added the bug Something isn't working label May 22, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@sailepradh sailepradh

Labels
bug Something isn't working
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@sailepradh