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Issues: SMD-Bioinformatics-Lund/SomaticPanelPipeline

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Issues list

Break down cnvkit process enhancement New feature or request
#77 opened Nov 4, 2024 by ramsainanduri
present LOH
#71 opened Aug 15, 2024 by ViktorHy
Add flag/profile for QC-only runs for tumor samples enhancement New feature or request
#70 opened Aug 13, 2024 by alkc
Sampling issue with seqtk bug Something isn't working
#68 opened Jul 19, 2024 by sailepradh
Tnscope problem with the insertion AF and AD calcuation bug Something isn't working
#67 opened May 22, 2024 by sailepradh
Add readthedocs
#58 opened Apr 3, 2024 by ramsainanduri
Tests for different subworkflows
#45 opened Dec 4, 2023 by sailepradh
VEP produces bugged CSQ-fields
#30 opened Oct 13, 2023 by ViktorHy
save all qc in json
#29 opened Oct 13, 2023 by ViktorHy
Create a json import of CNVs
#25 opened Sep 20, 2023 by ViktorHy
Automatic download/install singularity enhancement New feature or request
#24 opened Sep 20, 2023 by ViktorHy
Testing suites documentation Improvements or additions to documentation enhancement New feature or request question Further information is requested
#22 opened Sep 20, 2023 by ViktorHy
Make pipeline more develop-friendly enhancement New feature or request help wanted Extra attention is needed
#17 opened Sep 20, 2023 by ViktorHy
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