Add toggling of publishDir for merged reads

SMD-Bioinformatics-Lund · Feb 13, 2025 · b8d1ae1 · b8d1ae1
1 parent 57145f1
commit b8d1ae1
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -14,6 +14,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - Added `cmd.config`
 - Added `params.trace_timestamp` to `nextflow.config`
 - Added `changelog_update_reminder` GA workflow
+- Added optional ability to save merged reads
 
 ### Fixed
 

diff --git a/conf/modules.config b/conf/modules.config
@@ -23,7 +23,7 @@ process {
             path: { "${params.outdir}/fastq_pass_merged" },
             mode: params.publish_dir_mode,
             pattern: 'fastq_pass_merged',
-            enable: params.save_merged_reads
+            enabled: params.save_merged_reads
         ]
     }
 
@@ -32,7 +32,7 @@ process {
             path: { "${params.outdir}/fastq_pass_merged" },
             mode: params.publish_dir_mode,
             pattern: 'fastq_pass_merged',
-            enable: params.save_merged_reads
+            enabled: params.save_merged_reads
         ]
     }