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Merge pull request #4 from SMD-Bioinformatics-Lund/master-html-creati…
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…on-with-timestamps

Resolve GMS main merge bug
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ryanjameskennedy authored Feb 17, 2025
2 parents 99eff38 + bd81fd9 commit b9100cc
Showing 1 changed file with 0 additions and 5 deletions.
5 changes: 0 additions & 5 deletions workflows/gmsemu.nf
Original file line number Diff line number Diff line change
Expand Up @@ -88,9 +88,6 @@ workflow GMSEMU {
ch_input = GENERATE_INPUT.out.sample_sheet_merged
}

GENERATE_MASTER_HTML(GENERATE_INPUT.out.sample_sheet_merged)


//
// SUBWORKFLOW: Read in samplesheet, validate and stage input files
//
Expand Down Expand Up @@ -161,8 +158,6 @@ workflow GMSEMU {
error "Invalid seqtype. Please specify either 'map-ont' or 'sr'."
}



// Run EMU_ABUNDANCE
EMU_ABUNDANCE(ch_processed_reads)
ch_versions = ch_versions.mix(EMU_ABUNDANCE.out.versions.first())
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