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Fix ordering of versions. Add missing script addition to latest release.
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alkc authored Jun 30, 2023
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10 changes: 6 additions & 4 deletions CHANGELOG.md
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# CHANGELOG
### 3.4.3
#### patch genes
- added two more genes to expansionhunter variant catalogue.

### 3.5.0

#### Added

* Two processes for computing mitochondrial seq QC data from mt bam files and saving to JSON:
* Python3 script `bin/merge_json_files.py` to merge 1 or more JSON files into one JSON. Used to generate the final {id}.QC from the json output of the processes `sentieon_qc` and `sentieon_mitochondrial_qc`.
* Script `bin/merge_json_files.py` to merge 1 or more JSON files into one JSON. Used to generate the final {id}.QC from the json output of the processes `sentieon_qc` and `sentieon_mitochondrial_qc`.
* Script `bin/mito_tsv_to_json.py` to extract and convert mtQC data from `sentieon_mitochondrial_qc` process output to json

#### Changed

* process `sentieon_qc` outputs to intermediate {id}_qc.json file instead of the final {id}.QC

### 3.4.3
#### patch genes
- added two more genes to expansionhunter variant catalogue.

### 3.4.2
#### hotfix
- dont print Mitochondrion, we handle the mitochondrion seperatly in the pipeline, caused loqusdb errors
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