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Added Fiddaman 2023 #1198

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2956f08
Added Fiddaman 2023 sample table
aidaanva Oct 4, 2024
cae2b39
updated to correct taxonomic name for host
aidaanva Oct 4, 2024
4e7433a
added missing ERS code
aidaanva Oct 4, 2024
1f090f7
Update ancientsinglegenome-hostassociated_samples.tsv
aidaanva Nov 11, 2024
f4acb16
Added libraries info Fiddaman2023
aidaanva Nov 11, 2024
861ddcf
Corrected spelling mistakes
aidaanva Nov 12, 2024
af67df3
Convert the sample ages from CE to BP
alexhbnr Jan 1, 2025
9956471
Merge branch 'master' into Fiddaman2023
alexhbnr Jan 1, 2025
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -13,6 +13,7 @@ and this project follows to [Calendar Versioning](https://calver.org/).

#### Ancient Single Genome: Host Associated

- Fiddaman 2023 10.1126/science.adg2238 (added by @aidaanva)
- Susat 2024 10.1038/s42003-024-06676-7 (added by @MagdalenaHC)

#### Ancient Metagenome: Environmental
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43 changes: 43 additions & 0 deletions ...entsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv
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Expand Up @@ -3116,3 +3116,46 @@ Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 K
Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_2 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 779197269 ERR13081217 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/017/ERR13081217/ERR13081217.fastq.gz e3716b3fcc0dc508355bac4066e98440 30780770975
Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_3 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 331237067 ERR13081218 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/018/ERR13081218/ERR13081218.fastq.gz 859d36af02ca9bc64a77a6198d647339 13693431199
Susat2024 2024 10.1038/s42003-024-06676-7 Warburg_2 ENA PRJEB49648 ERS19529514 KH200218_4 double AccuPrime Pfx DNA half-udg Illumina NovaSeq 6000 SINGLE WGS 264407276 ERR13081219 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR130/019/ERR13081219/ERR13081219.fastq.gz e24316d796fcb34c2594f4aef1dc1a85 10868287934
Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 37042575 ERR11752794 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/094/ERR11752794/ERR11752794.fastq.gz 61b28af972bb99c8af64f6cc137cc84f 1221430231
Fiddaman2023 2023 10.1126/science.adg2238 OL1385 SRA PRJEB64489 ERS16164983 OL1385 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 12385850 ERR11752829 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/029/ERR11752829/ERR11752829.fastq.gz f33fbe0a91a977678b8b00eb598edc47 478376457
Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14284810 ERR11752821 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/021/ERR11752821/ERR11752821.fastq.gz 42a4d8479b85314b773b2154ed2ac4ab 797876394
Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 17498050 ERR11752819 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/019/ERR11752819/ERR11752819.fastq.gz 0f53118d59d4fa310bd8ad8985d30f60 780976768
Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13354174 ERR11752820 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/020/ERR11752820/ERR11752820.fastq.gz 774102835d045e5c1265d564dcda39db 705048039
Fiddaman2023 2023 10.1126/science.adg2238 OL2272 SRA PRJEB64489 ERS16164984 OL2272 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 4009656 ERR11752826 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/026/ERR11752826/ERR11752826.fastq.gz ffbdb5ba8066de958196e658c220b052 172669974
Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 14918027 ERR11752801 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/001/ERR11752801/ERR11752801.fastq.gz 233585ed450ade62105cad34d7657114 665276656
Fiddaman2023 2023 10.1126/science.adg2238 OL1984 SRA PRJEB64489 ERS16164985 OL1984 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 399816 ERR11752836 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/036/ERR11752836/ERR11752836.fastq.gz 8909d81e09ec7678b427cb94b06c1a7f 21075785
Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 31778764 ERR11752802 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/002/ERR11752802/ERR11752802.fastq.gz a753c7376d611562c9dfad5c49231b29 1448491519
Fiddaman2023 2023 10.1126/science.adg2238 OL1986 SRA PRJEB64489 ERS16164986 OL1986 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1382753 ERR11752837 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/037/ERR11752837/ERR11752837.fastq.gz 61712026cb96f12ff8419fd49abcea5f 71239939
Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13580762 ERR11752812 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/012/ERR11752812/ERR11752812.fastq.gz 9cde7f94d06fe759c11f7743c84cc5ba 481816518
Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19048033 ERR11752813 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/013/ERR11752813/ERR11752813.fastq.gz 5062d1c7d9b19cae8d3960a71f99217f 754542823
Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1180056 ERR11752789 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/089/ERR11752789/ERR11752789.fastq.gz 9583cbef85f1928ba764c31e6c694ffc 50854724
Fiddaman2023 2023 10.1126/science.adg2238 OL2178 SRA PRJEB64489 ERS16164987 OL2178i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 21850387 ERR11752811 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/011/ERR11752811/ERR11752811.fastq.gz c94158533a06984bbade6264a79baca9 849503959
Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7502551 ERR11752800 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/000/ERR11752800/ERR11752800.fastq.gz 70996dd13cc662f87f82d8e15e32d074 255227717
Fiddaman2023 2023 10.1126/science.adg2238 OL1936 SRA PRJEB64489 ERS16164988 OL1936 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 514773 ERR11752835 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/035/ERR11752835/ERR11752835.fastq.gz cf7ae7385254fbc368f1ad58ad8f2305 25314972
Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 6260607 ERR11752830 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/030/ERR11752830/ERR11752830.fastq.gz 4278f73e393ffb4c1997334d63da02eb 230231901
Fiddaman2023 2023 10.1126/science.adg2238 OL1389 SRA PRJEB64489 ERS16164989 OL1389 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 2755487 ERR11752795 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/095/ERR11752795/ERR11752795.fastq.gz af6467ca96f0cde487fcaeaa46f04deb 82930819
Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1271624 ERR11752838 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/038/ERR11752838/ERR11752838.fastq.gz 9a858ecc34f945de0db706a7a6c837f2 68021197
Fiddaman2023 2023 10.1126/science.adg2238 OL1987 SRA PRJEB64489 ERS16164990 OL1987 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 18536478 ERR11752803 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/003/ERR11752803/ERR11752803.fastq.gz f9f21a911e4325b6774abc9ba4100f16 951574389
Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 15068644 ERR11752810 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/010/ERR11752810/ERR11752810.fastq.gz 2d861ef1204de1972cf66d010b7bfb46 842427926
Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 39436478 ERR11752799 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/099/ERR11752799/ERR11752799.fastq.gz ebf2be69af0e70d81d07de899065e9e6 1579984549
Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 19370251 ERR11752809 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/009/ERR11752809/ERR11752809.fastq.gz f5c41bfb006fbb7529f7053cfeebaa69 1031334963
Fiddaman2023 2023 10.1126/science.adg2238 OL1934 SRA PRJEB64489 ERS16164991 OL1934 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 992802 ERR11752834 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/034/ERR11752834/ERR11752834.fastq.gz a9094c2a2c8d5916a9e4967db9c6bfd5 55769718
Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 10061322 ERR11752808 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/008/ERR11752808/ERR11752808.fastq.gz 4a92fe502c283d7f77a22c715a045041 415208529
Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 12046398 ERR11752807 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/007/ERR11752807/ERR11752807.fastq.gz 17c916719a2009fbc32f83edd3521778 499609022
Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1361554 ERR11752833 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/033/ERR11752833/ERR11752833.fastq.gz 887d9732eef613f5df159e67ed16cf21 49122284
Fiddaman2023 2023 10.1126/science.adg2238 OL1599 SRA PRJEB64489 ERS16164992 OL1599 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 6500466 ERR11752798 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/098/ERR11752798/ERR11752798.fastq.gz 80ab9700892ff2a1b27ece222d9a634e 196241935
Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 13990806 ERR11752818 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/018/ERR11752818/ERR11752818.fastq.gz b5d7892251467072310d35bc23b9da79 729548479
Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 7352560 ERR11752816 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/016/ERR11752816/ERR11752816.fastq.gz 45dc0bb7e87a7b35f038f29c55609a25 327426658
Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 8931251 ERR11752817 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/017/ERR11752817/ERR11752817.fastq.gz 562a8b2c522e044fc2a9566eac666574 485267477
Fiddaman2023 2023 10.1126/science.adg2238 OL2268 SRA PRJEB64489 ERS16164993 OL2268 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 5200014 ERR11752823 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/023/ERR11752823/ERR11752823.fastq.gz 3225e74fd871ab61f8e58b3a2f2b93d0 212944176
Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9537030 ERR11752814 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/014/ERR11752814/ERR11752814.fastq.gz ffb3748704649acb8a5f278187f58170 473911967
Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267iii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 9878005 ERR11752815 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/015/ERR11752815/ERR11752815.fastq.gz 94ab02e47e0b246cd0e5f451ffde17d8 516369461
Fiddaman2023 2023 10.1126/science.adg2238 OL2267 SRA PRJEB64489 ERS16164994 OL2267 double AmpliTaq Gold DNA none NextSeq 500 SINGLE Targeted-Capture 3254501 ERR11752822 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/022/ERR11752822/ERR11752822.fastq.gz eedc911ca610da88bdaa2507f3d24304 111253272
Fiddaman2023 2023 10.1126/science.adg2238 OL1999 SRA PRJEB64489 ERS16164995 OL1999 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 25492918 ERR11752804 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/004/ERR11752804/ERR11752804.fastq.gz e972d780aaeb0708186afd4ff8690030 991367683
Fiddaman2023 2023 10.1126/science.adg2238 OL1999 SRA PRJEB64489 ERS16164995 OL1999 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 1088286 ERR11752839 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/039/ERR11752839/ERR11752839.fastq.gz 04cef341d79f7fb746316b099b58d5f7 56951249
Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL1584 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 7420282 ERR11752831 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/031/ERR11752831/ERR11752831.fastq.gz f37f63735f8fc70717456a12e2e6e800 329465244
Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL1584 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 28498102 ERR11752796 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/096/ERR11752796/ERR11752796.fastq.gz a191a213262eeade5f2479680c741e7a 1116209127
Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL1584i double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 11122204 ERR11752805 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/005/ERR11752805/ERR11752805.fastq.gz 6b8ba95e5bd0ca2215385e1249b911f0 655353542
Fiddaman2023 2023 10.1126/science.adg2238 OL1584 SRA PRJEB64489 ERS16164996 OL1584ii double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 23678785 ERR11752806 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/006/ERR11752806/ERR11752806.fastq.gz 048c5746773f3c55c700d50f2e3dbb18 1664874891
Fiddaman2023 2023 10.1126/science.adg2238 OL1585 SRA PRJEB64489 ERS16164997 OL1585 double AmpliTaq Gold DNA none Illumina NovaSeq 6000 SINGLE Targeted-Capture 20374738 ERR11752797 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/097/ERR11752797/ERR11752797.fastq.gz f984b19b9778e16891f45ab5bc7394e4 584538336
Fiddaman2023 2023 10.1126/science.adg2238 OL1585 SRA PRJEB64489 ERS16164997 OL1585 double AmpliTaq Gold DNA none Illumina HiSeq 2500 SINGLE Targeted-Capture 2994421 ERR11752832 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR117/032/ERR11752832/ERR11752832.fastq.gz 05838e7aa914b34d6e43e0585467c2fc 109193304
15 changes: 15 additions & 0 deletions ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv
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Expand Up @@ -719,3 +719,18 @@ White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B6
White2021 2021 10.3390/biology10121324 Kuygenzhar 51.103 71.720 Kazakhstan B2_B7 Homo sapiens 200 10.3390/biology10121324 bacteria Porphyromonas gingivalis tooth chromosome ENA raw PRJEB49091 ERS9769383
Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_1 Homo sapiens 5200 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529513
Susat2024 2024 10.1038/s42003-024-06676-7 Warburg 51.488 9.133 Germany Warburg_2 Homo sapiens 5100 10.1038/s42003-024-06676-7 bacteria Yersinia pestis tooth chromosome ENA raw PRJEB49648 ERS19529514
Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1385 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164983
Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2272 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164984
Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1984 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164985
Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1986 Gallus gallus 500 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164986
Fiddaman2023 2023 10.1126/science.adg2238 Bard-e Mar (Bem), Kurdistan 35.161 46.370 Iran OL2178 Gallus gallus 100 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164987
Fiddaman2023 2023 10.1126/science.adg2238 Strasbourg Rue de Lucerne - Rue du Jeu de Paume 48.578 7.757 France OL1936 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164988
Fiddaman2023 2023 10.1126/science.adg2238 Buda Castle, Budapest, Teleki Palace 47.496 19.039 Hungary OL1389 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164989
Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1987 Gallus gallus 500 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164990
Fiddaman2023 2023 10.1126/science.adg2238 Andlau 48.388 7.414 France OL1934 Gallus gallus 900 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164991
Fiddaman2023 2023 10.1126/science.adg2238 Elabuga hillfort 55.746 52.032 Russia OL1599 Gallus gallus 300 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164992
Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2268 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164993
Fiddaman2023 2023 10.1126/science.adg2238 Naderi Tepe 38.01 57.02 Iran OL2267 Gallus gallus 200 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164994
Fiddaman2023 2023 10.1126/science.adg2238 Castillo de Montsoriu 41.783 2.540 Spain OL1999 Gallus gallus 500 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164995
Fiddaman2023 2023 10.1126/science.adg2238 Kazan City 55.791 49.121 Russia OL1584 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164996
Fiddaman2023 2023 10.1126/science.adg2238 Cheboksary City 56.152 47.246 Russia OL1585 Gallus gallus 400 10.1126/science.adg2238 virus Gallid alphaherpesvirus 2 bone chromosome SRA raw PRJEB64489 ERS16164997
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