add pat

Sage-Bionetworks · Dec 12, 2024 · 318c3e2 · 318c3e2
1 parent a3b4e6f
commit 318c3e2
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -143,7 +143,8 @@ jobs:
         docker pull ghcr.io/sage-bionetworks/genie:${{ github.ref_name }}
     
     - name: Run Tests in Docker Container
-      run: |
-        docker run --rm ghcr.io/sage-bionetworks/genie:${{ github.ref_name }}  \
-          python bin/input_to_database.py main --project_id syn7208886 --onlyValidate
+      run: >
+        docker run --rm -e SYNAPSE_AUTH_TOKEN="${{ secrets.SYNAPSE_AUTH_TOKEN }}" -it \
+        ghcr.io/sage-bionetworks/genie:${{ github.ref_name }} \
+        python bin/input_to_database.py main --project_id syn7208886 --onlyValidate