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Updated UniProt mapping notebook to include Agora nominated targets #166

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Updated UniProt mapping notebook to include Agora nominated targets #166

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e33f0a0
Updated UniProt mapping notebook to include Agora nominated target in…
jaclynbeck-sage Dec 17, 2024
361a8bb
Bumped version of Uniprot mapping file and pharos class file
jaclynbeck-sage Dec 18, 2024
64d2cef
Fixed type hinting in preprocessing_utils.py
jaclynbeck-sage Dec 18, 2024
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8 changes: 4 additions & 4 deletions config.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -167,10 +167,10 @@ datasets:
id: syn51942280.4
format: csv
- name: ensg_to_uniprot_mapping
id: syn54113663.3
id: syn54113663.5
format: tsv
- name: pharos_classes
id: syn64123611.1
id: syn64123611.2
format: csv
final_format: json
custom_transformations:
Expand Down Expand Up @@ -203,8 +203,8 @@ datasets:
- syn27211878.2
- *genes_biodomains_provenance
- syn51942280.4
- syn54113663.3
- syn64123611.1
- syn54113663.5
- syn64123611.2
agora_rename:
symbol: hgnc_symbol
destination: *dest
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