Merging mc2-center prod (#142)

* Config updates * Delete dca-template-config.json Moved to https://github.com/mc2-center/data-models/blob/data-models-dev/dca_config/dca-template-config.json, per data-models issue #42 https://github.com/orgs/mc2-center/projects/4/views/1?pane=issue&itemId=49063916 * Update dca_config.json Removed old entries in preparation for data model and template config URLs associated with newest data model release * Removed old templates Clearing out old templates - to be replaced by new templates, built from newest data model release (output from data-model release workflow) * Update dca_config.json Update URLs for raw data model and template config following MC2 data model release 4.1.0 * Update templates Adds regenerated templates, based on MC2 data model v4.1.0 --------- Co-authored-by: Orion Banks <[email protected]>
Sage-Bionetworks · Jan 23, 2024 · 4acb7ba · 4acb7ba
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diff --git a/MC2/dca-template-config.json b/MC2/dca-template-config.json
diff --git a/MC2/dca_config.json b/MC2/dca_config.json
@@ -2,9 +2,9 @@
   "dcc": {
     "name": "Cancer Complexity Knowledge Portal - Database",
     "synapse_asset_view": "syn27210848",
-    "data_model_url": "https://raw.githubusercontent.com/mc2-center/data-models/v3.0.0/mc2.model.jsonld",
+    "data_model_url": "https://raw.githubusercontent.com/mc2-center/data-models/v4.1.0/mc2.model.jsonld",
     "data_model_info": "",
-    "template_menu_config_file": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/prod/MC2/dca-template-config.json",
+    "template_menu_config_file": "https://raw.githubusercontent.com/mc2-center/data-models/v4.1.0/dca_config/dca-template-config.json",
     "logo_location": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/prod/MC2/cckp_logo.png",
     "logo_link": "https://cancercomplexity.synapse.org",
     "dcc_help_link": "",

diff --git a/MC2/templates/.DS_Store b/MC2/templates/.DS_Store
diff --git a/MC2/templates/Biospecimen.xlsx b/MC2/templates/Biospecimen.xlsx
diff --git a/MC2/templates/Consortium.xlsx b/MC2/templates/Consortium.xlsx
diff --git a/MC2/templates/ConsortiumGrant.xlsx b/MC2/templates/ConsortiumGrant.xlsx
diff --git a/MC2/templates/Dataset.xlsx b/MC2/templates/Dataset.xlsx
diff --git a/MC2/templates/DatasetGrant.xlsx b/MC2/templates/DatasetGrant.xlsx
diff --git a/MC2/templates/DatasetView.xlsx b/MC2/templates/DatasetView.xlsx
diff --git a/MC2/templates/EducationalResource.xlsx b/MC2/templates/EducationalResource.xlsx
diff --git a/MC2/templates/Grant.xlsx b/MC2/templates/Grant.xlsx
diff --git a/MC2/templates/GrantView.xlsx b/MC2/templates/GrantView.xlsx
diff --git a/MC2/templates/Institution.xlsx b/MC2/templates/Institution.xlsx
diff --git a/MC2/templates/InstitutionGrant.xlsx b/MC2/templates/InstitutionGrant.xlsx
diff --git a/MC2/templates/NanoStringGeoMXROISegmentAnnotation.xlsx b/MC2/templates/NanoStringGeoMXROISegmentAnnotation.xlsx
diff --git a/MC2/templates/NanoStringGeoMxDSPImagingLevel2.xlsx b/MC2/templates/NanoStringGeoMxDSPImagingLevel2.xlsx
diff --git a/MC2/templates/NanoStringGeoMxDSPLevel1.xlsx b/MC2/templates/NanoStringGeoMxDSPLevel1.xlsx
diff --git a/MC2/templates/NanoStringGeoMxDSPLevel2.xlsx b/MC2/templates/NanoStringGeoMxDSPLevel2.xlsx
diff --git a/MC2/templates/NanoStringGeoMxDSPLevel3.xlsx b/MC2/templates/NanoStringGeoMxDSPLevel3.xlsx
diff --git a/MC2/templates/Person.xlsx b/MC2/templates/Person.xlsx
diff --git a/MC2/templates/PersonConsortium.xlsx b/MC2/templates/PersonConsortium.xlsx
diff --git a/MC2/templates/PersonView.xlsx b/MC2/templates/PersonView.xlsx
diff --git a/MC2/templates/Project.xlsx b/MC2/templates/Project.xlsx
diff --git a/MC2/templates/ProjectView.xlsx b/MC2/templates/ProjectView.xlsx
diff --git a/MC2/templates/Publication.xlsx b/MC2/templates/Publication.xlsx
diff --git a/MC2/templates/PublicationGrant.xlsx b/MC2/templates/PublicationGrant.xlsx
diff --git a/MC2/templates/PublicationView.xlsx b/MC2/templates/PublicationView.xlsx
diff --git a/MC2/templates/PublicationViewDCA.xlsx b/MC2/templates/PublicationViewDCA.xlsx
diff --git a/MC2/templates/Theme.xlsx b/MC2/templates/Theme.xlsx
diff --git a/MC2/templates/ThemeGrant.xlsx b/MC2/templates/ThemeGrant.xlsx
diff --git a/MC2/templates/Tool.xlsx b/MC2/templates/Tool.xlsx
diff --git a/MC2/templates/ToolGrant.xlsx b/MC2/templates/ToolGrant.xlsx
diff --git a/MC2/templates/ToolView.xlsx b/MC2/templates/ToolView.xlsx