Skip to content

Commit

Permalink
VEOIBD staging test (#236)
Browse files Browse the repository at this point in the history
* VEOIBD config mods to try and resolve DCA internal server error

* testing staging DCA deployment before new schematic version to production by 1/10
  • Loading branch information
jmvera255 authored Jan 6, 2025
1 parent 537dce1 commit 97b71ba
Show file tree
Hide file tree
Showing 2 changed files with 17 additions and 14 deletions.
12 changes: 6 additions & 6 deletions VEOIBD/dca-template-config.json
Original file line number Diff line number Diff line change
Expand Up @@ -6,16 +6,16 @@
"type": "record"
},
{
"display_name": "Biospecimen Metadata Template",
"schema_name": "BiospecimenMetadataTemplate",
"display_name": "Medication History Metadata Template",
"schema_name": "MedicationHistoryMetadataTemplate",
"type": "record"
},
{
"display_name": "scRNAseq Assay Template",
"schema_name": "ScRNASeqAssayTemplate",
"type": "file"
"display_name": "Biospecimen Metadata Template",
"schema_name": "BiospecimenMetadataTemplate",
"type": "record"
}
],
"service_version": "v23.1.1",
"service_version": "",
"schema_version": ""
}
19 changes: 11 additions & 8 deletions VEOIBD/dca_config.json
Original file line number Diff line number Diff line change
Expand Up @@ -3,12 +3,12 @@
"name": "VEOIBD",
"synapse_asset_view": "syn51397378",
"data_model_url": "https://raw.githubusercontent.com/VEOIBD/data_models/main/veoibd.data.model.jsonld",
"data_model_info": "",
"template_menu_config_file": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/staging/VEOIBD/dca-template-config.json",
"data_model_info": "https://veoibd.github.io/data_models/",
"template_menu_config_file": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/prod/VEOIBD/dca-template-config.json",
"logo_location": "https://raw.githubusercontent.com/Sage-Bionetworks/data_curator_config/prod/VEOIBD/VEOIBD Logo.png",
"logo_link": "https://veoibd.org",
"dcc_help_link": "",
"portal_help_link": ""
"dcc_help_link": "https://dca-docs.scrollhelp.site/DCA/Working-version/VEOIBD/?l=en",
"portal_help_link": "https://www.synapse.org/Synapse:syn29377188/wiki/619107"
},
"dca": {
"use_compliance_dashboard": false,
Expand All @@ -18,20 +18,23 @@
},
"schematic": {
"global": {
"data_model_labels": "class_label"
"data_model_labels" : "class_label"
},
"manifest_generate": {
"output_format": "excel",
"use_annotations": false
},
"model_validate": {
"restrict_rules": true
"restrict_rules": false,
"enable_cross_manifest_validation": false
},
"model_submit": {
"use_schema_labels": true,
"table_column_names": "display_label",
"table_manipulation": "replace",
"annotation_keys": "display_label",
"manifest_record_type": "file_only",
"hide_blanks": false
"hide_blanks": false,
"file_annotations_upload": true
}
}
}

0 comments on commit 97b71ba

Please sign in to comment.