Skip to content
@Salk-Harnessing-Plants-Initiative

Salk Harnessing Plants Initiative

End climate change

Pinned Loading

  1. data-system data-system Public

    The main Salk HPI Data System for tracking plants and their phenotypic data in the lab, greenhouse, and field. Integrates with QR code tracking. Makes querying past experiments (+ images, etc.) and…

    Python

Repositories

Showing 10 of 32 repositories
  • Ariadne Public
    Salk-Harnessing-Plants-Initiative/Ariadne’s past year of commit activity
    Python 2 GPL-3.0 1 1 0 Updated Aug 28, 2024
  • Salk-Harnessing-Plants-Initiative/PAT-Pipeline-for-Analysis-of-Periderm’s past year of commit activity
    Python 0 MIT 2 0 1 Updated Jan 24, 2024
  • Salk-Harnessing-Plants-Initiative/camera_calibration’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 0 0 Updated Nov 21, 2023
  • aws-s3-desktop-uploader Public

    Python script for uploading files to an AWS S3 bucket with some additional features

    Salk-Harnessing-Plants-Initiative/aws-s3-desktop-uploader’s past year of commit activity
    Python 0 0 1 0 Updated Jun 3, 2023
  • data-system Public

    The main Salk HPI Data System for tracking plants and their phenotypic data in the lab, greenhouse, and field. Integrates with QR code tracking. Makes querying past experiments (+ images, etc.) and environmental data easier.

    Salk-Harnessing-Plants-Initiative/data-system’s past year of commit activity
    Python 0 0 2 2 Updated Jan 28, 2023
  • plant-independent-image-uploader Public

    Uploading standalone images to AWS

    Salk-Harnessing-Plants-Initiative/plant-independent-image-uploader’s past year of commit activity
    Python 0 0 0 0 Updated Jan 26, 2022
  • chorylab-HyDE Public

    This is the official repo for HyDE (Hypocotyl Determining Engine), a hardware and software pipeline that measures hypocotyl growth in time-series images. By Benjamin J. Cole

    Salk-Harnessing-Plants-Initiative/chorylab-HyDE’s past year of commit activity
    MATLAB 0 0 0 0 Updated Jan 2, 2022
  • greenhouse-giraffe-uploader Public

    Python-based Windows service to upload Giraffe images to AWS S3. The Giraffe is a custom imaging apparatus we use in our greenhouse.

    Salk-Harnessing-Plants-Initiative/greenhouse-giraffe-uploader’s past year of commit activity
    Python 0 0 0 0 Updated Mar 26, 2021
  • plant-cylinder-uploader Public

    Python-based Windows service to upload cylinder images to AWS S3

    Salk-Harnessing-Plants-Initiative/plant-cylinder-uploader’s past year of commit activity
    Python 1 0 0 0 Updated Mar 26, 2021
  • DSLR-camera-barcode-imaging-guide Public

    Control a Sony A7RII camera (normal DSLR camera) from a Windows computer and integrate with barcode scanning to image some artifacts at high throughput. This guide will allow you to set the filename of each image as the value scanned from the label.

    Salk-Harnessing-Plants-Initiative/DSLR-camera-barcode-imaging-guide’s past year of commit activity
    0 0 0 0 Updated Mar 24, 2021

Top languages

Loading…

Most used topics

Loading…