R script used to generate the figures and stats for the paper:
Greenrod, S.T.E., Stoycheva, M., Elphinstone, J. et al. Global diversity and distribution of prophages are lineage-specific within the Ralstonia solanacearum species complex. BMC Genomics 23, 689 (2022). https://doi.org/10.1186/s12864-022-08909-7
All files used in the R script are available in the "R_analysis_files" folder. If there are any problems running the code or accessing the data, please start an issue.