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Recover traditional env for binder
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cofinoa committed Apr 22, 2024
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66 changes: 66 additions & 0 deletions binder/environment.yml
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name: binder-atlas-climate4r-v2.5.4
channels:
- conda-forge
- nodefaults # only conda-forge dependencies
- conda-forge/label/broken # just in case some dependencies become "broken"
dependencies:
# explicit dependency on R and Python versions
- r-base ==3.6.3
- python ==3.7.12
# climate4R v2.5.4 dependencies
- r-climate4r.udg ==0.2.3
- r-loader.java ==1.1.1
- r-loader ==1.7.1
- r-loader.ecoms ==1.4.6
- r-transformer ==2.1.3
- r-downscaler ==3.3.3
- r-downscaler.keras ==1.0.0
- r-visualizer ==1.6.1
- r-convertr ==0.2.0
- r-geoprocessor ==0.2.0
- r-climate4r.climdex ==0.2.2
- r-climate4r.indices ==0.2.0
- r-loader.2nc ==0.1.2
- r-firedanger ==1.1.0
- r-value ==2.2.2
- r-climate4r.value ==0.0.2
- r-mopa ==1.0.0
- r-drought4r ==0.2.0
- r-climate4r.datasets ==0.0.1
- iris

# Jupyter and JupyterHub dependencies
- r-irkernel
- jupyter #==1.0.0
- jupyterhub #==1.4.2
- notebook #==6.4.2
- jupyterlab #==3.1.4
- jupyter_nbextensions_configurator
- jupyterlab-git
- jupyterlab-github
- jupyterlab-topbar
- jupyterlab-topbar-text
- jupyterlab-system-monitor

# required for decouple binder and repo
- nbgitpuller
# required for jupyter books
- jupyter-book
- jupytext >=0.16
- docutils <0.18|>=0.20 # BUG with bib and HTML layout: https://github.com/mcmtroffaes/sphinxcontrib-bibtex/issues/322
# R extra dependencies used by notebooks and/or scripts
- r-devtools
- r-gridextra
- r-xtable
- r-magrittr
- r-httr
- r-lattice
- r-latticeextra
# Python extra dependencies used by notebooks and/or scripts
- xarray
- regionmask
# Other extra dependencies used by notebooks and/or scripts
- cdo
- nco
# explici PIP dependency
- pip

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