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kedhammar committed Mar 5, 2024
1 parent bc6b6d7 commit 2b9c8f9
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tests/nanopore/test_ONT_run_classes.py
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ def make_ONT_test_config(tmp: tempfile.TemporaryDirectory) -> dict:
metadata_dir: {tmp.name}/ngi-nas-ns/promethion_data
destination: {tmp.name}/miarka/promethion/
minion:
transfer_log: /{tmp.name}/log/transfer_minion.tsv
transfer_log: {tmp.name}/log/transfer_minion.tsv
archive_dir: {tmp.name}/sequencing/minion/nosync
metadata_dir: {tmp.name}/ngi-nas-ns/minion_data
destination: {tmp.name}/miarka/minion/
Expand Down Expand Up @@ -186,7 +186,7 @@ def create_ONT_run_dir(
with open(f"{run_path}/.anglerfish_ongoing", "w") as f:
f.write("1337")

if anglerfish_exit:
if anglerfish_exit is not None:
with open(f"{run_path}/.anglerfish_done", "w") as f:
f.write(str(anglerfish_exit))

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