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ruff check
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kedhammar committed Sep 2, 2024
1 parent 7e84ac1 commit 9052caa
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Showing 3 changed files with 3 additions and 6 deletions.
2 changes: 0 additions & 2 deletions taca/analysis/analysis_element.py
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Expand Up @@ -6,8 +6,6 @@

from taca.element.Element_Runs import Aviti_Run
from taca.utils.config import CONFIG
from taca.utils import statusdb


logger = logging.getLogger(__name__)

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3 changes: 1 addition & 2 deletions taca/analysis/cli.py
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Expand Up @@ -3,8 +3,7 @@
import click

from taca.analysis import analysis as an
from taca.analysis import analysis_nanopore
from taca.analysis import analysis_element
from taca.analysis import analysis_element, analysis_nanopore


@click.group()
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4 changes: 2 additions & 2 deletions taca/element/Element_Runs.py
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@@ -1,6 +1,6 @@
import json
import logging
import os
import json
from datetime import datetime

from taca.utils import misc
Expand Down Expand Up @@ -63,7 +63,7 @@ def start_demux(self):
with chdir(self.run_dir):
cmd = self.generate_demux_command()
misc.call_external_command_detached(
cmd, with_log_files=True, prefix=f"demux_"
cmd, with_log_files=True, prefix="demux_"
)
logger.info(
"Bases2Fastq conversion and demultiplexing "
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