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Update Anglerfish parsing to handle runs w/o ONT barcodes #7

Update Anglerfish parsing to handle runs w/o ONT barcodes

Update Anglerfish parsing to handle runs w/o ONT barcodes #7

Workflow file for this run

name: Check VERSIONLOG.MD has been updated
on: [pull_request]
jobs:
check-versionlog:
runs-on: ubuntu-latest
steps:
- name: Checkout PR
uses: actions/checkout@v3
with:
fetch-depth: 0 # Fetch all history for all branches and tags
- name: Check for VERSIONLOG.MD changes
id: versionlog_check
# 1) Find the common ancestor between the current HEAD and the base branch
# 2) Then see if the versionlog has been updated in the PR since it diverged
# from the common ancestor
run: |
PR_BASE_SHA=$(git merge-base HEAD ${{ github.event.pull_request.base.sha }})
FILE_CHANGED=$(git diff --name-only $PR_BASE_SHA HEAD | grep 'VERSIONLOG.md' || true)
if [ -n "$FILE_CHANGED" ]; then
echo "VERSIONLOG.MD has been changed."
else
echo "VERSIONLOG.MD has NOT been changed."
exit 1 # Fail the workflow if no changes in VERSIONLOG.MD
fi