Avoid importing from sub-submodules

requake/catalog/__init__.py

@@ -9,5 +9,9 @@
     GNU General Public License v3.0 or later
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
+from .catalog import (  # noqa
+    RequakeCatalog, RequakeEvent, generate_evid,
+    fix_non_locatable_events, read_stored_catalog
+)
 from .read_catalog import read_catalog  # noqa
 from .print_catalog import print_catalog  # noqa

requake/catalog/catalog.py

@@ -12,8 +12,8 @@
 import numpy as np
 from obspy import UTCDateTime
 from ..config import config
-from ..formulas.conversion import float_or_none
-from ..waveforms.station_metadata import get_traceid_coords
+from ..formulas import float_or_none
+from ..waveforms import get_traceid_coords
 
 
 class RequakeEvent():

requake/catalog/print_catalog.py

@@ -10,9 +10,8 @@
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
 import logging
-from ..config import rq_exit
+from ..config import rq_exit, generic_printer
 from .catalog import read_stored_catalog
-from ..config.generic_printer import generic_printer
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/catalog/read_catalog.py

@@ -13,7 +13,7 @@
 import logging
 import contextlib
 from ..config import config, rq_exit
-from ..catalog.catalog import RequakeCatalog
+from ..catalog import RequakeCatalog
 from .read_catalog_from_fdsnws import read_catalog_from_fdsnws
 from .read_catalog_from_quakeml import read_catalog_from_quakeml
 from .read_catalog_from_csv import read_catalog_from_csv

requake/catalog/read_catalog_from_csv.py

@@ -12,9 +12,8 @@
 import logging
 import csv
 from obspy import UTCDateTime
-from ..formulas.conversion import float_or_none, int_or_none
-from ..catalog.catalog import (
-    RequakeCatalog, RequakeEvent, generate_evid)
+from ..formulas import float_or_none, int_or_none
+from ..catalog import RequakeCatalog, RequakeEvent, generate_evid
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/catalog/read_catalog_from_fdsnws.py

@@ -15,7 +15,7 @@
 from obspy import UTCDateTime
 from obspy.clients.fdsn.header import URL_MAPPINGS
 from ..config import config
-from ..catalog.catalog import RequakeCatalog, RequakeEvent
+from ..catalog import RequakeCatalog, RequakeEvent
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/catalog/read_catalog_from_quakeml.py

@@ -11,7 +11,7 @@
 """
 import logging
 from obspy import read_events
-from ..catalog.catalog import RequakeCatalog, RequakeEvent
+from ..catalog import RequakeCatalog, RequakeEvent
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/config/__init__.py

@@ -10,6 +10,7 @@
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
 from .rq_setup import rq_exit  # noqa
+from .generic_printer import generic_printer  # noqa
 # The config object is created in config.py and needs to be populated
 # when using requake from command line, this is done by the configure()
 # function in rq_setup.py

requake/families/__init__.py

@@ -15,3 +15,8 @@
 from .print_families import print_families  # noqa
 from .flag_family import flag_family  # noqa
 from .build_templates import build_templates  # noqa
+from .families import (  # noqa
+    read_families, read_selected_families,
+    get_family_aligned_waveforms_and_template,
+    FamilyNotFoundError
+)

requake/families/families.py

@@ -15,12 +15,9 @@
 from obspy import UTCDateTime, Stream
 from obspy.geodetics import gps2dist_azimuth
 from ..config import config
-from ..formulas.conversion import float_or_none
-from ..catalog.catalog import RequakeEvent
-from ..waveforms.waveforms import (
-    get_event_waveform, align_traces, build_template)
-from ..formulas.slip import mag_to_slip_in_cm
-from ..formulas.moment import mag_to_moment
+from ..formulas import float_or_none, mag_to_slip_in_cm, mag_to_moment
+from ..catalog import RequakeEvent
+from ..waveforms import get_event_waveform, align_traces, build_template
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/families/pairs.py

@@ -13,8 +13,8 @@
 import csv
 from obspy import UTCDateTime
 from ..config import config
-from ..formulas.conversion import float_or_none
-from ..catalog.catalog import RequakeEvent
+from ..formulas import float_or_none
+from ..catalog import RequakeEvent
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/families/print_families.py

@@ -11,9 +11,8 @@
 """
 import logging
 import numpy as np
+from ..config import generic_printer, rq_exit
 from .families import FamilyNotFoundError, read_selected_families
-from ..config.generic_printer import generic_printer
-from ..config import rq_exit
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 
 

requake/families/print_pairs.py

@@ -10,8 +10,7 @@
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
 import logging
-from ..config import config, rq_exit
-from ..config.generic_printer import generic_printer
+from ..config import config, rq_exit, generic_printer
 from .pairs import read_pairs_file
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 

requake/formulas/__init__.py

@@ -10,4 +10,5 @@
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
 from .moment import mag_to_moment  # noqa
-from .slip import mag_to_slip_in_cm # noqa
+from .slip import mag_to_slip_in_cm  # noqa
+from .conversion import float_or_none, int_or_none  # noqa

requake/plot/map_families.py

@@ -17,6 +17,7 @@
 import cartopy.feature as cfeature
 from obspy.geodetics import gps2dist_azimuth
 from ..config import config, rq_exit
+from ..families import FamilyNotFoundError, read_selected_families
 from .plot_utils import (
     plot_title, hover_annotation, duration_string, family_colors, plot_colorbar
 )
@@ -29,7 +30,6 @@
     StamenTerrain,
     WorldStreetMap
 )
-from ..families.families import FamilyNotFoundError, read_selected_families
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 # Reduce logging level for Matplotlib to avoid DEBUG messages
 mpl_logger = logging.getLogger('matplotlib')

requake/plot/plot_cumulative.py

@@ -15,12 +15,12 @@
 import matplotlib.pyplot as plt
 from matplotlib.ticker import MaxNLocator
 from ..config import config, rq_exit
+from ..families import FamilyNotFoundError, read_selected_families
+from ..formulas import mag_to_slip_in_cm, mag_to_moment
 from .plot_utils import (
     format_time_axis, plot_title, hover_annotation, duration_string,
     family_colors, plot_colorbar
 )
-from ..families.families import FamilyNotFoundError, read_selected_families
-from ..formulas import mag_to_slip_in_cm, mag_to_moment
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 # Reduce logging level for Matplotlib to avoid DEBUG messages
 mpl_logger = logging.getLogger('matplotlib')

requake/plot/plot_families.py

@@ -17,11 +17,12 @@
 from obspy.signal.filter import envelope
 from obspy.signal.util import smooth
 from ..config import config, rq_exit
-from ..families.families import (
+from ..families import (
     FamilyNotFoundError,
     read_selected_families,
-    get_family_aligned_waveforms_and_template)
-from ..waveforms.waveforms import process_waveforms
+    get_family_aligned_waveforms_and_template
+)
+from ..waveforms import process_waveforms
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 # Reduce logging level for Matplotlib to avoid DEBUG messages
 mpl_logger = logging.getLogger('matplotlib')

requake/plot/plot_pair.py

@@ -13,9 +13,8 @@
 import matplotlib as mpl
 import matplotlib.pyplot as plt
 from ..config import config, rq_exit
-from ..catalog.catalog import fix_non_locatable_events, read_stored_catalog
-from ..waveforms.waveforms import (
-    get_waveform_pair, process_waveforms, align_pair)
+from ..catalog import fix_non_locatable_events, read_stored_catalog
+from ..waveforms import get_waveform_pair, process_waveforms, align_pair
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 # Reduce logging level for Matplotlib to avoid DEBUG messages
 mpl_logger = logging.getLogger('matplotlib')

requake/plot/plot_timespans.py

@@ -14,11 +14,11 @@
 import matplotlib.pyplot as plt
 import numpy as np
 from ..config import config, rq_exit
+from ..families import FamilyNotFoundError, read_selected_families
 from .plot_utils import (
     format_time_axis, plot_title, hover_annotation, duration_string,
     family_colors, plot_colorbar
 )
-from ..families.families import FamilyNotFoundError, read_selected_families
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 # Reduce logging level for Matplotlib to avoid DEBUG messages
 mpl_logger = logging.getLogger('matplotlib')

requake/scan/scan_catalog.py

@@ -16,10 +16,10 @@
 from tqdm import tqdm
 from obspy.geodetics import gps2dist_azimuth
 from ..config import config, rq_exit
-from ..catalog.catalog import fix_non_locatable_events, read_stored_catalog
-from ..waveforms.station_metadata import NoMetadataError, MetadataMismatchError
-from ..waveforms.waveforms import (
-    get_waveform_pair, cc_waveform_pair, NoWaveformError,
+from ..catalog import fix_non_locatable_events, read_stored_catalog
+from ..waveforms import (
+    get_waveform_pair, cc_waveform_pair,
+    NoWaveformError, NoMetadataError, MetadataMismatchError
 )
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 

requake/scan/scan_templates.py

@@ -14,11 +14,11 @@
 import sys
 from obspy import read
 from ..config import config, rq_exit
-from ..families.families import (
-    FamilyNotFoundError, read_families, read_selected_families)
-from ..waveforms.waveforms import get_waveform, cc_waveform_pair
-from ..waveforms.arrivals import get_arrivals
-from ..catalog.catalog import RequakeEvent, generate_evid
+from ..families import (
+    FamilyNotFoundError, read_families, read_selected_families
+)
+from ..waveforms import get_waveform, cc_waveform_pair, get_arrivals
+from ..catalog import RequakeEvent, generate_evid
 from .._version import get_versions
 logger = logging.getLogger(__name__.rsplit('.', maxsplit=1)[-1])
 trace_cache = {}

requake/waveforms/__init__.py

@@ -9,3 +9,15 @@
     GNU General Public License v3.0 or later
     (https://www.gnu.org/licenses/gpl-3.0-standalone.html)
 """
+from .waveforms import (  # noqa
+    get_waveform, get_event_waveform,
+    get_waveform_pair, cc_waveform_pair,
+    process_waveforms,
+    align_pair, align_traces,
+    build_template,
+    NoWaveformError
+)
+from .station_metadata import (  # noqa
+    get_traceid_coords, NoMetadataError, MetadataMismatchError
+)
+from .arrivals import get_arrivals  # noqa