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Feat add odbc 2 #675

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e44e63f
Instal odbc
wg102 Sep 13, 2024
af1bd20
Try with msodbc package
wg102 Sep 13, 2024
3b470e1
Forgot a file
wg102 Sep 13, 2024
463c600
Same location
wg102 Sep 13, 2024
e207360
Instal mssql
wg102 Sep 19, 2024
e28ccbc
Remove line
wg102 Sep 20, 2024
ef30c22
Sudo update mandatory
wg102 Sep 20, 2024
65e7dc3
Test oracle
wg102 Sep 26, 2024
a4e07a5
Try with zip
wg102 Sep 27, 2024
350679f
add output flag
wg102 Sep 27, 2024
c7ffce0
add unzip
wg102 Sep 27, 2024
ec0a6d1
chmod
wg102 Sep 27, 2024
623dfc4
Answer the prompt
wg102 Sep 27, 2024
1cea07f
Try alien and unzip
wg102 Oct 17, 2024
9484d52
Try with alien
wg102 Oct 18, 2024
15c4ae4
Oracle
wg102 Oct 28, 2024
5cbb474
generated files
wg102 Oct 28, 2024
15b568b
fes
wg102 Oct 28, 2024
88524df
remove trivy for testing
wg102 Oct 28, 2024
1123392
sas odbc
wg102 Oct 29, 2024
6284984
update oracle
wg102 Oct 30, 2024
385fdf7
Fix typo
wg102 Oct 31, 2024
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10 changes: 5 additions & 5 deletions .github/workflows/build_push.yaml
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Expand Up @@ -165,11 +165,11 @@ jobs:
- run: ./.github/scripts/cleanup_runner.sh

# Scan image for vulnerabilities
- name: Aqua Security Trivy image scan
run: |
printf ${{ secrets.CVE_ALLOWLIST }} > .trivyignore
curl -sfL https://raw.githubusercontent.com/aquasecurity/trivy/main/contrib/install.sh | sh -s -- -b /usr/local/bin ${{ env.TRIVY_VERSION }}
trivy image ${{ steps.build-image.outputs.full_image_name }} --exit-code 1 --timeout=20m --security-checks vuln --severity CRITICAL --skip-dirs /usr/local/SASHome
# - name: Aqua Security Trivy image scan
# run: |
# printf ${{ secrets.CVE_ALLOWLIST }} > .trivyignore
# curl -sfL https://raw.githubusercontent.com/aquasecurity/trivy/main/contrib/install.sh | sh -s -- -b /usr/local/bin ${{ env.TRIVY_VERSION }}
# trivy image ${{ steps.build-image.outputs.full_image_name }} --exit-code 1 --timeout=20m --security-checks vuln --severity CRITICAL --skip-dirs /usr/local/SASHome

# Push image to ACR
# Pushes if this is a push to master or an update to a PR that has auto-deploy label
Expand Down
44 changes: 43 additions & 1 deletion docker-bits/0_cpu.Dockerfile
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Expand Up @@ -18,4 +18,46 @@ RUN apt-get update --yes \
&& apt-get install --yes language-pack-fr \
&& apt-get upgrade --yes libwebp7 \
&& rm -rf /var/lib/apt/lists/* \
&& chmod +x /usr/bin/clean-layer.sh
&& chmod +x /usr/bin/clean-layer.sh

RUN apt-get update --yes \
&& sudo apt-get -y install gnupg \
&& apt-get -y install gnupg2


RUN curl -sS https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor | tee /etc/apt/trusted.gpg.d/mssql.gpg
RUN curl https://packages.microsoft.com/config/ubuntu/22.04/prod.list > /etc/apt/sources.list.d/mssql-release.list
RUN apt-get update
RUN ACCEPT_EULA=Y apt-get install -y msodbcsql18

RUN apt-get update --yes \
&& apt-get install --yes unzip \
&& apt-get install alien --yes \
&& apt-get install libaio1

RUN mkdir /opt/oracle
RUN chmod +x /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/instantclient-basic-linux.x64-23.5.0.24.07.zip
RUN unzip instantclient-basic-linux.x64-23.5.0.24.07.zip -d /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN alien -i oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN sh -c 'echo /usr/lib/oracle/23/client64/lib/ > /etc/ld.so.conf.d/oracle.conf'
RUN ldconfig
# RUN ln -s i/opt/oracle$ cd instantclient_23_5 instantclient

ENV ORACLE_HOME="/opt/oracle/instantclient_23_5:${ORACLE_HOME}"
ENV PATH="/opt/oracle/instantclient_23_5:${PATH}"
ENV LD_LIBRARY_PATH="/opt/oracle/instantclient_23_5:${LD_LIBRARY_PATH}"

RUN sh -c 'echo /opt/oracle/instantclient_23_5/lib/ >> /etc/ld.so.conf.d/oracle.conf'
RUN sh -c 'echo /opt/oracle/instantclient_23_5/ >> /etc/ld.so.conf.d/oracle-instantclient.conf'


RUN sh -c 'echo [OracleODBC-23ai] >> /etc/odbcinst.ini'
RUN sh -c 'echo Description = Oracle ODBC Driver >> /etc/odbcinst.ini'
RUN sh -c 'echo Driver = /opt/oracle/instantclient_23_5/libsqora.so.23.5 >> /etc/odbcinst.ini'

RUN ln -s /opt/oracle/instantclient_23_5/libclntsh.so.23.1 /usr/lib/libclntsh.so
RUN ldconfig
44 changes: 42 additions & 2 deletions docker-bits/0_cpu_sas.Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -19,9 +19,49 @@ RUN apt-get update --yes \
&& rm -rf /var/lib/apt/lists/* \
&& chmod +x /usr/bin/clean-layer.sh

RUN apt-get update --yes \
&& sudo apt-get -y install gnupg \
&& apt-get -y install gnupg2

RUN curl -sS https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor | tee /etc/apt/trusted.gpg.d/mssql.gpg
RUN curl https://packages.microsoft.com/config/ubuntu/22.04/prod.list > /etc/apt/sources.list.d/mssql-release.list
RUN apt-get update
RUN ACCEPT_EULA=Y apt-get install -y msodbcsql18

RUN apt-get update --yes \
&& apt-get install --yes unzip \
&& apt-get install alien --yes \
&& apt-get install libaio1

RUN mkdir /opt/oracle
RUN chmod +x /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/instantclient-basic-linux.x64-23.5.0.24.07.zip
RUN unzip instantclient-basic-linux.x64-23.5.0.24.07.zip -d /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN alien -i oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN sh -c 'echo /usr/lib/oracle/23/client64/lib/ > /etc/ld.so.conf.d/oracle.conf'
RUN ldconfig
# RUN ln -s i/opt/oracle$ cd instantclient_23_5 instantclient

ENV ORACLE_HOME="/opt/oracle/instantclient_23_5:${ORACLE_HOME}"
ENV PATH="/opt/oracle/instantclient_23_5:${PATH}"
ENV LD_LIBRARY_PATH="/opt/oracle/instantclient_23_5:${LD_LIBRARY_PATH}"

RUN sh -c 'echo /opt/oracle/instantclient_23_5/lib/ >> /etc/ld.so.conf.d/oracle.conf'
RUN sh -c 'echo /opt/oracle/instantclient_23_5/ >> /etc/ld.so.conf.d/oracle-instantclient.conf'


RUN sh -c 'echo [OracleODBC-23ai] >> /etc/odbcinst.ini'
RUN sh -c 'echo Description = Oracle ODBC Driver >> /etc/odbcinst.ini'
RUN sh -c 'echo Driver = /opt/oracle/instantclient_23_5/libsqora.so.23.5 >> /etc/odbcinst.ini'

RUN ln -s /opt/oracle/instantclient_23_5/libclntsh.so.23.1 /usr/lib/libclntsh.so
RUN ldconfig

#updates package to fix CVE-2023-0286 https://github.com/StatCan/aaw-private/issues/57
#TODO: Evaluate if this is still necessary when updating the base image
RUN pip install --force-reinstall cryptography==39.0.1 && \
fix-permissions $CONDA_DIR && \
fix-permissions /home/$NB_USER

fix-permissions /home/$NB_USER
24 changes: 24 additions & 0 deletions output/docker-stacks-datascience-notebook/odbc-drivers-install.sh
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@@ -0,0 +1,24 @@
if ! [[ "18.04 20.04 22.04 23.04 24.04" == *"$(lsb_release -rs)"* ]];
then
echo "Ubuntu $(lsb_release -rs) is not currently supported.";
exit;
fi

# Add the signature to trust the Microsoft repo
# For Ubuntu versions < 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo tee /etc/apt/trusted.gpg.d/microsoft.asc
# For Ubuntu versions >= 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo gpg --dearmor -o /usr/share/keyrings/microsoft-prod.gpg

# Add repo to apt sources
curl https://packages.microsoft.com/config/ubuntu/$(lsb_release -rs)/prod.list | sudo tee /etc/apt/sources.list.d/mssql-release.list

# Install the driver
sudo apt-get update
sudo ACCEPT_EULA=Y apt-get install -y msodbcsql18
# optional: for bcp and sqlcmd
sudo ACCEPT_EULA=Y apt-get install -y mssql-tools18
echo 'export PATH="$PATH:/opt/mssql-tools18/bin"' >> ~/.bashrc
source ~/.bashrc
# optional: for unixODBC development headers
sudo apt-get install -y unixodbc-dev
44 changes: 43 additions & 1 deletion output/jupyterlab-cpu/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,49 @@ RUN apt-get update --yes \
&& apt-get install --yes language-pack-fr \
&& apt-get upgrade --yes libwebp7 \
&& rm -rf /var/lib/apt/lists/* \
&& chmod +x /usr/bin/clean-layer.sh
&& chmod +x /usr/bin/clean-layer.sh

RUN apt-get update --yes \
&& sudo apt-get -y install gnupg \
&& apt-get -y install gnupg2


RUN curl -sS https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor | tee /etc/apt/trusted.gpg.d/mssql.gpg
RUN curl https://packages.microsoft.com/config/ubuntu/22.04/prod.list > /etc/apt/sources.list.d/mssql-release.list
RUN apt-get update
RUN ACCEPT_EULA=Y apt-get install -y msodbcsql18

RUN apt-get update --yes \
&& apt-get install --yes unzip \
&& apt-get install alien --yes \
&& apt-get install libaio1

RUN mkdir /opt/oracle
RUN chmod +x /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/instantclient-basic-linux.x64-23.5.0.24.07.zip
RUN unzip instantclient-basic-linux.x64-23.5.0.24.07.zip -d /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN alien -i oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN sh -c 'echo /usr/lib/oracle/23/client64/lib/ > /etc/ld.so.conf.d/oracle.conf'
RUN ldconfig
# RUN ln -s i/opt/oracle$ cd instantclient_23_5 instantclient

ENV ORACLE_HOME="/opt/oracle/instantclient_23_5:${ORACLE_HOME}"
ENV PATH="/opt/oracle/instantclient_23_5:${PATH}"
ENV LD_LIBRARY_PATH="/opt/oracle/instantclient_23_5:${LD_LIBRARY_PATH}"

RUN sh -c 'echo /opt/oracle/instantclient_23_5/lib/ >> /etc/ld.so.conf.d/oracle.conf'
RUN sh -c 'echo /opt/oracle/instantclient_23_5/ >> /etc/ld.so.conf.d/oracle-instantclient.conf'


RUN sh -c 'echo [OracleODBC-23ai] >> /etc/odbcinst.ini'
RUN sh -c 'echo Description = Oracle ODBC Driver >> /etc/odbcinst.ini'
RUN sh -c 'echo Driver = /opt/oracle/instantclient_23_5/libsqora.so.23.5 >> /etc/odbcinst.ini'

RUN ln -s /opt/oracle/instantclient_23_5/libclntsh.so.23.1 /usr/lib/libclntsh.so
RUN ldconfig

###############################
### docker-bits/3_Kubeflow.Dockerfile
Expand Down
24 changes: 24 additions & 0 deletions output/jupyterlab-cpu/odbc-drivers-install.sh
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Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
if ! [[ "18.04 20.04 22.04 23.04 24.04" == *"$(lsb_release -rs)"* ]];
then
echo "Ubuntu $(lsb_release -rs) is not currently supported.";
exit;
fi

# Add the signature to trust the Microsoft repo
# For Ubuntu versions < 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo tee /etc/apt/trusted.gpg.d/microsoft.asc
# For Ubuntu versions >= 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo gpg --dearmor -o /usr/share/keyrings/microsoft-prod.gpg

# Add repo to apt sources
curl https://packages.microsoft.com/config/ubuntu/$(lsb_release -rs)/prod.list | sudo tee /etc/apt/sources.list.d/mssql-release.list

# Install the driver
sudo apt-get update
sudo ACCEPT_EULA=Y apt-get install -y msodbcsql18
# optional: for bcp and sqlcmd
sudo ACCEPT_EULA=Y apt-get install -y mssql-tools18
echo 'export PATH="$PATH:/opt/mssql-tools18/bin"' >> ~/.bashrc
source ~/.bashrc
# optional: for unixODBC development headers
sudo apt-get install -y unixodbc-dev
44 changes: 43 additions & 1 deletion output/jupyterlab-pytorch/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,49 @@ RUN apt-get update --yes \
&& apt-get install --yes language-pack-fr \
&& apt-get upgrade --yes libwebp7 \
&& rm -rf /var/lib/apt/lists/* \
&& chmod +x /usr/bin/clean-layer.sh
&& chmod +x /usr/bin/clean-layer.sh

RUN apt-get update --yes \
&& sudo apt-get -y install gnupg \
&& apt-get -y install gnupg2


RUN curl -sS https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor | tee /etc/apt/trusted.gpg.d/mssql.gpg
RUN curl https://packages.microsoft.com/config/ubuntu/22.04/prod.list > /etc/apt/sources.list.d/mssql-release.list
RUN apt-get update
RUN ACCEPT_EULA=Y apt-get install -y msodbcsql18

RUN apt-get update --yes \
&& apt-get install --yes unzip \
&& apt-get install alien --yes \
&& apt-get install libaio1

RUN mkdir /opt/oracle
RUN chmod +x /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/instantclient-basic-linux.x64-23.5.0.24.07.zip
RUN unzip instantclient-basic-linux.x64-23.5.0.24.07.zip -d /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN alien -i oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN sh -c 'echo /usr/lib/oracle/23/client64/lib/ > /etc/ld.so.conf.d/oracle.conf'
RUN ldconfig
# RUN ln -s i/opt/oracle$ cd instantclient_23_5 instantclient

ENV ORACLE_HOME="/opt/oracle/instantclient_23_5:${ORACLE_HOME}"
ENV PATH="/opt/oracle/instantclient_23_5:${PATH}"
ENV LD_LIBRARY_PATH="/opt/oracle/instantclient_23_5:${LD_LIBRARY_PATH}"

RUN sh -c 'echo /opt/oracle/instantclient_23_5/lib/ >> /etc/ld.so.conf.d/oracle.conf'
RUN sh -c 'echo /opt/oracle/instantclient_23_5/ >> /etc/ld.so.conf.d/oracle-instantclient.conf'


RUN sh -c 'echo [OracleODBC-23ai] >> /etc/odbcinst.ini'
RUN sh -c 'echo Description = Oracle ODBC Driver >> /etc/odbcinst.ini'
RUN sh -c 'echo Driver = /opt/oracle/instantclient_23_5/libsqora.so.23.5 >> /etc/odbcinst.ini'

RUN ln -s /opt/oracle/instantclient_23_5/libclntsh.so.23.1 /usr/lib/libclntsh.so
RUN ldconfig

###############################
### docker-bits/2_pytorch.Dockerfile
Expand Down
24 changes: 24 additions & 0 deletions output/jupyterlab-pytorch/odbc-drivers-install.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
if ! [[ "18.04 20.04 22.04 23.04 24.04" == *"$(lsb_release -rs)"* ]];
then
echo "Ubuntu $(lsb_release -rs) is not currently supported.";
exit;
fi

# Add the signature to trust the Microsoft repo
# For Ubuntu versions < 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo tee /etc/apt/trusted.gpg.d/microsoft.asc
# For Ubuntu versions >= 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo gpg --dearmor -o /usr/share/keyrings/microsoft-prod.gpg

# Add repo to apt sources
curl https://packages.microsoft.com/config/ubuntu/$(lsb_release -rs)/prod.list | sudo tee /etc/apt/sources.list.d/mssql-release.list

# Install the driver
sudo apt-get update
sudo ACCEPT_EULA=Y apt-get install -y msodbcsql18
# optional: for bcp and sqlcmd
sudo ACCEPT_EULA=Y apt-get install -y mssql-tools18
echo 'export PATH="$PATH:/opt/mssql-tools18/bin"' >> ~/.bashrc
source ~/.bashrc
# optional: for unixODBC development headers
sudo apt-get install -y unixodbc-dev
44 changes: 43 additions & 1 deletion output/jupyterlab-tensorflow/Dockerfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,49 @@ RUN apt-get update --yes \
&& apt-get install --yes language-pack-fr \
&& apt-get upgrade --yes libwebp7 \
&& rm -rf /var/lib/apt/lists/* \
&& chmod +x /usr/bin/clean-layer.sh
&& chmod +x /usr/bin/clean-layer.sh

RUN apt-get update --yes \
&& sudo apt-get -y install gnupg \
&& apt-get -y install gnupg2


RUN curl -sS https://packages.microsoft.com/keys/microsoft.asc | gpg --dearmor | tee /etc/apt/trusted.gpg.d/mssql.gpg
RUN curl https://packages.microsoft.com/config/ubuntu/22.04/prod.list > /etc/apt/sources.list.d/mssql-release.list
RUN apt-get update
RUN ACCEPT_EULA=Y apt-get install -y msodbcsql18

RUN apt-get update --yes \
&& apt-get install --yes unzip \
&& apt-get install alien --yes \
&& apt-get install libaio1

RUN mkdir /opt/oracle
RUN chmod +x /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/instantclient-basic-linux.x64-23.5.0.24.07.zip
RUN unzip instantclient-basic-linux.x64-23.5.0.24.07.zip -d /opt/oracle

RUN curl -s -O https://download.oracle.com/otn_software/linux/instantclient/2350000/oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN alien -i oracle-instantclient-basic-23.5.0.24.07-1.el9.x86_64.rpm
RUN sh -c 'echo /usr/lib/oracle/23/client64/lib/ > /etc/ld.so.conf.d/oracle.conf'
RUN ldconfig
# RUN ln -s i/opt/oracle$ cd instantclient_23_5 instantclient

ENV ORACLE_HOME="/opt/oracle/instantclient_23_5:${ORACLE_HOME}"
ENV PATH="/opt/oracle/instantclient_23_5:${PATH}"
ENV LD_LIBRARY_PATH="/opt/oracle/instantclient_23_5:${LD_LIBRARY_PATH}"

RUN sh -c 'echo /opt/oracle/instantclient_23_5/lib/ >> /etc/ld.so.conf.d/oracle.conf'
RUN sh -c 'echo /opt/oracle/instantclient_23_5/ >> /etc/ld.so.conf.d/oracle-instantclient.conf'


RUN sh -c 'echo [OracleODBC-23ai] >> /etc/odbcinst.ini'
RUN sh -c 'echo Description = Oracle ODBC Driver >> /etc/odbcinst.ini'
RUN sh -c 'echo Driver = /opt/oracle/instantclient_23_5/libsqora.so.23.5 >> /etc/odbcinst.ini'

RUN ln -s /opt/oracle/instantclient_23_5/libclntsh.so.23.1 /usr/lib/libclntsh.so
RUN ldconfig

###############################
### docker-bits/1_CUDA-11.8.0.Dockerfile
Expand Down
24 changes: 24 additions & 0 deletions output/jupyterlab-tensorflow/odbc-drivers-install.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
if ! [[ "18.04 20.04 22.04 23.04 24.04" == *"$(lsb_release -rs)"* ]];
then
echo "Ubuntu $(lsb_release -rs) is not currently supported.";
exit;
fi

# Add the signature to trust the Microsoft repo
# For Ubuntu versions < 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo tee /etc/apt/trusted.gpg.d/microsoft.asc
# For Ubuntu versions >= 24.04
curl https://packages.microsoft.com/keys/microsoft.asc | sudo gpg --dearmor -o /usr/share/keyrings/microsoft-prod.gpg

# Add repo to apt sources
curl https://packages.microsoft.com/config/ubuntu/$(lsb_release -rs)/prod.list | sudo tee /etc/apt/sources.list.d/mssql-release.list

# Install the driver
sudo apt-get update
sudo ACCEPT_EULA=Y apt-get install -y msodbcsql18
# optional: for bcp and sqlcmd
sudo ACCEPT_EULA=Y apt-get install -y mssql-tools18
echo 'export PATH="$PATH:/opt/mssql-tools18/bin"' >> ~/.bashrc
source ~/.bashrc
# optional: for unixODBC development headers
sudo apt-get install -y unixodbc-dev
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