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Issues list

Genome location
#78 by ag1805x was closed Jan 13, 2025
1
Minimap2 aligner, only support for fa.gz/.fa files instead of mmi index files
#74 by SergeWielhouwer was closed Oct 1, 2024
1
Aligner warning: Killed Aligner warning: (ERR): bowtie2-align exited with value 137
#72 by Ayush09-cmd was closed Sep 27, 2024
3
Question on reads mapping to multiple genomes
#71 by HenriettaHolze was closed Jul 10, 2024
1
No reference genomes were configured, please adjust configuration
#70 by Linnaeus001 was closed May 16, 2024
4
Reference genomes on Babraham Bioinformatics website are no longer available for download
#69 by kuanyili was closed Apr 17, 2024
3
Filtering was killed
#65 by Eduardo-Auer was closed Sep 6, 2023
1
Unable to download v0.15.3 FastQ-Screen or --get_genomes
#64 by Weng-yann was closed Aug 21, 2023
1
issue installing..
#62 by chorong5155 was closed Jul 23, 2023
1
Skipping DATABASE
#61 by airbender97 was closed Feb 19, 2023
1
FastQC on output
#60 by christiane-morecock was closed Apr 3, 2023
5
Question- how to include no hit reads into final fastq data while screening?
#57 by anilchauhanhp9 was closed Sep 23, 2022
1
Only "no hits" in the output!!
#56 by Hela06 was closed Aug 30, 2022
3
can we download a subset of index database?
#55 by M-gowda was closed Jun 13, 2022
1
Fail to install GD module
#53 by ericjuo was closed Mar 21, 2022
1
Support for STAR
#52 by perinom was closed Mar 2, 2022
2
--get_genomes download failed
#47 by trfeuerborn was closed Jan 26, 2022
8
Error while performing --bisulfite read mapping
#46 by rbpisupati was closed Jan 14, 2022
4
Error with certificate for --get-genome
#39 by SebastienNin was closed Oct 19, 2021
7
R1 and R2 generate map differently to the human genome
#38 by ghost was closed Aug 24, 2021
4
Changeable Bowtie2 options (--very-fast)
#37 by LucasFVoges was closed Jan 14, 2022
3
With BWA, R1 & R2 files can have very different mapping signatures
#36 by cbird808 was closed Jan 14, 2022
7
How many nucleotides (bp) need to be matched between one read of our genome and reference genome?
#35 by lida-R was closed Jan 14, 2022
2
How to run Fastq-screen on paired end RNA-Seq data?
#32 by lida-R was closed Sep 30, 2020
5
Pairing filtered FASTQ files enhancement New feature or request
#31 by StevenWingett was closed Apr 26, 2021
10
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