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@TCP-Lab

TCP-Lab

The Turin Cell Physiology Lab Github organization
README.md

Welcome to TCP-Lab's Organization

Who are you?

We are a small team of bioinformaticians working for the University of Turin, based in Turin, Italy. Our team is outlined below. We are part of a bigger organization, the Turin Cell Physiology Lab (TCP-Lab), where we study a wide range of subjects, but mostly centered around cancer and general physiology. You can find CMA-Lab's ResearchGate page here.

Where are you?

We are based in the Department of Life Sciences and Systems Biology, in Via Accademia Albertina, 13, Turin, Italy.

What do you do?

We are currently interested in understanding the role of ion channels and transporters in Cancer and other diseases. Being physiologists by heart, we are mostly interested in the physiological changes of cancer.

Meet the team

Federico Alessandro Ruffinatti

Federico Alessandro Ruffinatti




Luca Visentin

Luca Visentin

Popular repositories Loading

  1. bioTEA bioTEA Public

    bioTEA - A user friendly tool to perform transcript expression analysis

    Python 3 2

  2. r4tcpl r4tcpl Public

    A collection of utility R functions used in a variety of our projects.

    R 2

  3. MTP-DB MTP-DB Public

    The Membrane Transport Protein Database

    Python 1

  4. x.FASTQ x.FASTQ Public

    Bash wrapper modules for the remote analysis of RNA-Seq data, with persistency features.

    Shell 1

  5. Atlas Atlas Public archive

    A dynamic interface with many remote databases of biological data

    Python

  6. bioTEA-box bioTEA-box Public

    The BioTEA's Docker container code

    R

Repositories

Showing 10 of 18 repositories
  • x.FASTQ Public

    Bash wrapper modules for the remote analysis of RNA-Seq data, with persistency features.

    TCP-Lab/x.FASTQ’s past year of commit activity
    Shell 1 MIT 0 6 0 Updated Jul 22, 2024
  • r4tcpl Public

    A collection of utility R functions used in a variety of our projects.

    TCP-Lab/r4tcpl’s past year of commit activity
    R 2 0 0 0 Updated Jul 19, 2024
  • transportome_profiler Public

    Code to profile the expression of the transportome

    TCP-Lab/transportome_profiler’s past year of commit activity
    R 0 GPL-3.0 0 4 1 Updated Jul 2, 2024
  • compare_ranks Public

    An R package to compare ranked lists of stuff

    TCP-Lab/compare_ranks’s past year of commit activity
    R 0 0 0 0 Updated Jul 2, 2024
  • SeqLoader Public

    Constructors and methods for `xSeries` and `xModel` S3 classes

    TCP-Lab/SeqLoader’s past year of commit activity
    R 0 0 6 0 Updated Jun 19, 2024
  • data Public

    Protocols and HOW-Tos to manage data for the lab

    TCP-Lab/data’s past year of commit activity
    0 0 0 0 Updated Mar 13, 2024
  • gene_ranker Public

    Rank genes based on their expression following various metrics

    TCP-Lab/gene_ranker’s past year of commit activity
    Python 0 0 2 0 Updated Feb 27, 2024
  • MTP-DB Public

    The Membrane Transport Protein Database

    TCP-Lab/MTP-DB’s past year of commit activity
    Python 1 GPL-3.0 0 12 (2 issues need help) 0 Updated Feb 27, 2024
  • ICT.bib Public

    A systematic compilation of all works about the transportome, or transportome-related

    TCP-Lab/ICT.bib’s past year of commit activity
    TeX 0 0 2 0 Updated Feb 19, 2024
  • docker-images Public

    Base recipies for docker images used by the lab

    TCP-Lab/docker-images’s past year of commit activity
    Shell 0 0 0 0 Updated Jan 25, 2024
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