save pnas classifiers in new keras formats

ThomasMBury · Feb 5, 2025 · b3c6779 · b3c6779
1 parent 982e621
commit b3c6779
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Showing 42 changed files with 30 additions and 14 deletions.
diff --git a/convert_SavedModel_to_h5.py b/convert_SavedModel_to_h5.py
diff --git a/convert_keras_model_format.py b/convert_keras_model_format.py
@@ -0,0 +1,30 @@
+import keras
+import os
+
+len_model = 1500
+
+# ### Convert SaveModel format to h5 format
+# list_files = os.listdir(f'saved_classifiers/bury_pnas_21/len{len_model}/')
+# pkl_files = [f for f in list_files if f[-4:]=='.pkl']
+
+# for pkl_file in pkl_files:
+#     model = keras.models.load_model(f'saved_classifiers/bury_pnas_21/len{len_model}/{pkl_file}')
+#     #Save the model into h5 format
+#     model_h5_name = pkl_file[:-4]+".h5"
+#     model.save(f'saved_classifiers/bury_pnas_21/len{len_model}/{model_h5_name}')
+#     print(f'saved model as {model_h5_name}')
+
+### Convert h5 format to .keras format
+list_files = os.listdir(f"saved_classifiers/bury_pnas_21/len{len_model}/")
+h5_files = [f for f in list_files if f[-3:] == ".h5"]
+
+for h5_file in h5_files:
+    model = keras.models.load_model(
+        f"saved_classifiers/bury_pnas_21/len{len_model}/{h5_file}"
+    )
+    # Save the model into h5 format
+    model_keras_format_name = h5_file[:-3] + ".keras"
+    model.save(
+        f"saved_classifiers/bury_pnas_21/len{len_model}/{model_keras_format_name}"
+    )
+    print(f"saved model as {model_keras_format_name}")
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_10_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_10_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_10_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_10_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_1_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_1_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_1_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_1_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_2_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_2_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_2_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_2_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_3_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_3_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_3_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_3_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_4_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_4_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_4_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_4_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_5_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_5_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_5_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_5_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_6_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_6_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_6_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_6_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_7_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_7_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_7_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_7_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_8_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_8_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_8_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_8_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_9_1_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_9_1_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len1500/best_model_9_2_len1500.keras b/saved_classifiers/bury_pnas_21/len1500/best_model_9_2_len1500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_10_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_10_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_10_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_10_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_1_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_1_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_1_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_1_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_2_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_2_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_2_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_2_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_3_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_3_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_3_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_3_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_4_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_4_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_4_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_4_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_5_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_5_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_5_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_5_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_6_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_6_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_6_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_6_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_7_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_7_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_7_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_7_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_8_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_8_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_8_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_8_2_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_9_1_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_9_1_len500.keras
diff --git a/saved_classifiers/bury_pnas_21/len500/best_model_9_2_len500.keras b/saved_classifiers/bury_pnas_21/len500/best_model_9_2_len500.keras