Bump codecov/codecov-action from 4 to 5 #356
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| name: Examples | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - 'src/**' | |
| - 'examples/**' | |
| - '.github/workflows/Example.yml' | |
| - 'Project.toml' | |
| jobs: | |
| jupyter: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [windows-latest] # ubuntu-latest] | |
| file-name: [simple_hybrid_CS, simple_hybrid_ME, juliacon_2023, modelica_conference_2021] | |
| julia-version: ['1.10'] | |
| julia-arch: [x64] | |
| experimental: [false] | |
| steps: | |
| - name: "Check out repository" | |
| uses: actions/checkout@v4 | |
| - name: "Set up Julia" | |
| uses: julia-actions/setup-julia@v2 | |
| with: | |
| version: ${{ matrix.julia-version }} | |
| arch: ${{ matrix.julia-arch }} | |
| - name: "Install dependencies" | |
| run: julia --project=examples/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()' | |
| - name: "Install packages" | |
| run: pip install jupyter nbconvert | |
| - name: "Execute notebook" | |
| env: | |
| FILE: examples/jupyter-src/${{ matrix.file-name }}.ipynb | |
| run: jupyter nbconvert --ExecutePreprocessor.kernel_name="julia-${{ matrix.julia-version }}" --to notebook --inplace --execute ${{ env.FILE }} | |
| - name: "Fix SVGs" # on notebook (json) level: removes all cells, that have the tag "text/html" AND have "<?xml " within their content | |
| run: julia -e 'using Pkg; Pkg.add("JSON"); using JSON; data = JSON.parsefile(joinpath("examples", "jupyter-src", "${{ matrix.file-name }}.ipynb"); use_mmap=false); function search_and_remove!(json, tag, content=""); if typeof(json) == Vector{Any}; for e in json; search_and_remove!(e, tag, content); end; elseif typeof(json) == Dict{String, Any}; for (t, c) in json; if contains(t, tag) && (content == "" || any([contains(line, content) for line in c])); pop!(json, t); else; search_and_remove!(c, tag, content); end; end; end; end; search_and_remove!(data, "text/html", "<?xml "); open(joinpath("examples", "jupyter-src", "tmp_${{ matrix.file-name }}.ipynb"),"w") do f; JSON.print(f, data, 1); end; mv(joinpath("examples", "jupyter-src", "tmp_${{ matrix.file-name }}.ipynb"), joinpath("examples", "jupyter-src", "${{ matrix.file-name }}.ipynb"); force=true);' | |
| - name: "Export notebook to jl and md" | |
| env: | |
| FILE: examples/jupyter-src/${{ matrix.file-name }}.ipynb | |
| run: | | |
| jupyter nbconvert --to script ${{ env.FILE }} | |
| jupyter nbconvert --to markdown ${{ env.FILE }} | |
| - name: "Fix GIFs" # on md level, requires .gif to be exportet prior during execution and follow naming convention of gifs: gif_1.gif, gif_2.gif, ... | |
| run: | | |
| echo "starting gif fixing" | |
| mv examples/jupyter-src/gif_*.gif examples/jupyter-src/${{ matrix.file-name }}_files | |
| $env:Path += ";C:\Program Files\Git\usr\bin" | |
| awk '{if($0~/<img src="data:image\/gif;base64,[[:alpha:],[:digit:],\/,+,=]*" \/>/) {sub(/<img src="data:image\/gif;base64,[[:alpha:],[:digit:],\/,+,=]*" \/>/,"![gif](${{ matrix.file-name }}_files\/gif_"++i".gif)")}}1' examples/jupyter-src/${{ matrix.file-name }}.md > examples/jupyter-src/tmp_${{ matrix.file-name }}.md | |
| mv -Force examples/jupyter-src/tmp_${{ matrix.file-name }}.md examples/jupyter-src/${{ matrix.file-name }}.md | |
| echo "gifs should be fixed" | |
| - name: "run generated jl script to determine success of example building" | |
| run: julia --project=examples/ examples/jupyter-src/${{ matrix.file-name }}.jl | |
| - name: "auto-commit (retry on merge)" | |
| if: success() && github.event_name != 'pull_request' && github.ref_name == 'main' | |
| uses: nick-fields/retry@v3 | |
| env: | |
| CI_COMMIT_MESSAGE: jupyter-example-${{ matrix.file-name }}-${{ matrix.os }}-${{ matrix.julia-version }}-${{ matrix.julia-arch }}-${{ matrix.experimental }}[${{ github.ref_name }}] | |
| CI_COMMIT_AUTHOR: github-actions[bot] | |
| EXAMPLES_PATH: examples/jupyter-src | |
| # Fetch all and clear the stash list. Include all files from the examples folder to the stash and switch the branch. | |
| # Reset the branch and remove all current files in the examples folder. | |
| # Checkout the last stash to restore the new notebooks and apply the stash index to restore all other new files in the folder. | |
| with: | |
| timeout_minutes: 999 | |
| max_attempts: 10 | |
| warning_on_retry: false | |
| shell: bash | |
| command: | | |
| git fetch --all | |
| git stash clear | |
| git stash --include-untracked -- ${{ env.EXAMPLES_PATH }}/${{ matrix.file-name }}* | |
| git switch examples | |
| git reset --hard origin/examples | |
| rm -r ${{ env.EXAMPLES_PATH }}/${{ matrix.file-name }}* | |
| git checkout stash -f -- ${{ env.EXAMPLES_PATH }} | |
| git stash apply --index | |
| git stash drop | |
| git config --global user.name "${{ env.CI_COMMIT_AUTHOR }}" | |
| git config --global user.email "${{ env.CI_COMMIT_AUTHOR }}@users.noreply.github.com" | |
| git config --global core.autocrlf false | |
| git pull | |
| git reset | |
| git add ${{ env.EXAMPLES_PATH }}/${{ matrix.file-name }}* | |
| git commit -m "${{ env.CI_COMMIT_MESSAGE }}" | |
| git push origin examples || (git reset --soft HEAD~1 && (exit 1)) | |
| pluto: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: "Check out repository" | |
| uses: actions/checkout@v4 | |
| - name: "Set up Julia" | |
| uses: julia-actions/setup-julia@v2 | |
| with: | |
| version: '1.10' | |
| - run: julia -e 'using Pkg; Pkg.add("PlutoSliderServer");' | |
| - run: julia -e 'using PlutoSliderServer; PlutoSliderServer.export_directory("examples/pluto-src")' | |
| - name: "auto-commit (retry on merge)" | |
| if: success() && github.event_name != 'pull_request' && github.ref_name == 'main' | |
| uses: nick-fields/retry@v3 | |
| env: | |
| CI_COMMIT_MESSAGE: pluto-examples[${{ github.ref_name }}] | |
| CI_COMMIT_AUTHOR: github-actions[bot] | |
| EXAMPLES_PATH: examples/pluto-src | |
| # Fetch all and clear the stash list. Include all files from the examples folder to the stash and switch the branch. | |
| # Reset the branch and remove all current files in the examples folder. | |
| # Checkout the last stash to restore the new notebooks and apply the stash index to restore all other new files in the folder. | |
| with: | |
| timeout_minutes: 999 | |
| max_attempts: 10 | |
| warning_on_retry: false | |
| shell: bash | |
| command: | | |
| git fetch --all | |
| git stash clear | |
| git stash --include-untracked -- ${{ env.EXAMPLES_PATH }} | |
| git switch examples | |
| git reset --hard origin/examples | |
| rm -r ${{ env.EXAMPLES_PATH }}/* | |
| git checkout stash -f -- ${{ env.EXAMPLES_PATH }} | |
| git stash apply --index | |
| git stash drop | |
| git config --global user.name "${{ env.CI_COMMIT_AUTHOR }}" | |
| git config --global user.email "${{ env.CI_COMMIT_AUTHOR }}@users.noreply.github.com" | |
| git config --global core.autocrlf false | |
| git pull | |
| git reset | |
| git add ${{ env.EXAMPLES_PATH }} | |
| git commit -m "${{ env.CI_COMMIT_MESSAGE }}" | |
| git push origin examples || (git reset --soft HEAD~1 && (exit 1)) | |
| call-docu: | |
| needs: [jupyter, pluto] | |
| if: github.event_name != 'pull_request' && github.ref_name == 'main' | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Trigger an repoisitory dispath event | |
| - name: Repository Dispatch | |
| uses: peter-evans/repository-dispatch@v3 | |
| with: | |
| event-type: trigger-docu |