wip pep8 pylinting

.github/workflows/pylint.yml

@@ -0,0 +1,23 @@
+name: Pylint
+
+on: [push]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ["3.8", "3.9", "3.10"]
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v3
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install pylint
+    - name: Analysing the code with pylint
+      run: |
+        pylint $(git ls-files '*.py')

blm/blm_cluster.py

@@ -25,9 +25,11 @@ def _main(argv=None):
         help='Path to inputs yaml file')
 
     # Parse the arguments
-    args = parser.parse_args()
+    if argv is None:
+        args = parser.parse_args()
+    else:
+        args = parser.parse_args(argv)
 
-    # If the argument is just a filename without a directory,
     # prepend the current working directory
     if os.path.dirname(args.inputs_yml) == '':
         args.inputs_yml = os.path.join(os.getcwd(), args.inputs_yml)

test/blm_cluster_test.py

@@ -4,15 +4,14 @@
 from cleanup import cleanup
 from generate_test_data import *
 import os
-import numpy
-import pandas
-import dask
-import subprocess
-from scipy import ndimage
 from dask.distributed import Client, as_completed
+<<<<<<< HEAD
 from dask.distributed import performance_report
 import nibabel as nib
 import sys
+=======
+import sys  
+>>>>>>> 4b40fb10a03c65cca1f0f6f335327690dc2b8d05
 
 # Get the directory containing the script
 test_dir = os.path.dirname(__file__)