reorg of experiments

Tractables · Dec 31, 2023 · df7a38a · df7a38a
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diff --git a/benchmarks/aqua/aqua_data.py → baselines/aqua/aqua_data.py b/benchmarks/aqua/aqua_data.py → baselines/aqua/aqua_data.py
diff --git a/...les/conjugate_gaussians_2/analysis_mu.txt → ...les/conjugate_gaussians_2/analysis_mu.txt b/...les/conjugate_gaussians_2/analysis_mu.txt → ...les/conjugate_gaussians_2/analysis_mu.txt
diff --git a/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R b/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R
diff --git a/...te_gaussians_2/conjugate_gaussians_2.stan → ...te_gaussians_2/conjugate_gaussians_2.stan b/...te_gaussians_2/conjugate_gaussians_2.stan → ...te_gaussians_2/conjugate_gaussians_2.stan
diff --git a/...es/conjugate_gaussians_2/results_1200.txt → ...es/conjugate_gaussians_2/results_1200.txt b/...es/conjugate_gaussians_2/results_1200.txt → ...es/conjugate_gaussians_2/results_1200.txt
diff --git a/...rks/aqua/examples/or_5/analysis_gene1.txt → ...nes/aqua/examples/or_5/analysis_gene1.txt b/...rks/aqua/examples/or_5/analysis_gene1.txt → ...nes/aqua/examples/or_5/analysis_gene1.txt
diff --git a/...ks/aqua/examples/or_5/analysis_prior1.txt → ...es/aqua/examples/or_5/analysis_prior1.txt b/...ks/aqua/examples/or_5/analysis_prior1.txt → ...es/aqua/examples/or_5/analysis_prior1.txt
diff --git a/...ks/aqua/examples/or_5/analysis_prior2.txt → ...es/aqua/examples/or_5/analysis_prior2.txt b/...ks/aqua/examples/or_5/analysis_prior2.txt → ...es/aqua/examples/or_5/analysis_prior2.txt
diff --git a/...ks/aqua/examples/or_5/analysis_prior3.txt → ...es/aqua/examples/or_5/analysis_prior3.txt b/...ks/aqua/examples/or_5/analysis_prior3.txt → ...es/aqua/examples/or_5/analysis_prior3.txt
diff --git a/...ks/aqua/examples/or_5/analysis_prior4.txt → ...es/aqua/examples/or_5/analysis_prior4.txt b/...ks/aqua/examples/or_5/analysis_prior4.txt → ...es/aqua/examples/or_5/analysis_prior4.txt
diff --git a/...ks/aqua/examples/or_5/analysis_prior5.txt → ...es/aqua/examples/or_5/analysis_prior5.txt b/...ks/aqua/examples/or_5/analysis_prior5.txt → ...es/aqua/examples/or_5/analysis_prior5.txt
diff --git a/benchmarks/aqua/examples/or_5/or_5.data.R → baselines/aqua/examples/or_5/or_5.data.R b/benchmarks/aqua/examples/or_5/or_5.data.R → baselines/aqua/examples/or_5/or_5.data.R
diff --git a/benchmarks/aqua/examples/or_5/or_5.stan → baselines/aqua/examples/or_5/or_5.stan b/benchmarks/aqua/examples/or_5/or_5.stan → baselines/aqua/examples/or_5/or_5.stan
diff --git a/benchmarks/aqua/examples/or_5/or_5.template → baselines/aqua/examples/or_5/or_5.template b/benchmarks/aqua/examples/or_5/or_5.template → baselines/aqua/examples/or_5/or_5.template
diff --git a/...marks/aqua/examples/or_5/results_1200.txt → ...lines/aqua/examples/or_5/results_1200.txt b/...marks/aqua/examples/or_5/results_1200.txt → ...lines/aqua/examples/or_5/results_1200.txt
diff --git a/...arks/aqua/examples/yvg/analysis_mu[1].txt → ...ines/aqua/examples/yvg/analysis_mu[1].txt b/...arks/aqua/examples/yvg/analysis_mu[1].txt → ...ines/aqua/examples/yvg/analysis_mu[1].txt
diff --git a/...arks/aqua/examples/yvg/analysis_mu[2].txt → ...ines/aqua/examples/yvg/analysis_mu[2].txt b/...arks/aqua/examples/yvg/analysis_mu[2].txt → ...ines/aqua/examples/yvg/analysis_mu[2].txt
diff --git a/...arks/aqua/examples/yvg/analysis_theta.txt → ...ines/aqua/examples/yvg/analysis_theta.txt b/...arks/aqua/examples/yvg/analysis_theta.txt → ...ines/aqua/examples/yvg/analysis_theta.txt
diff --git a/benchmarks/aqua/examples/yvg/results.txt → baselines/aqua/examples/yvg/results.txt b/benchmarks/aqua/examples/yvg/results.txt → baselines/aqua/examples/yvg/results.txt
diff --git a/benchmarks/aqua/examples/yvg/results1.txt → baselines/aqua/examples/yvg/results1.txt b/benchmarks/aqua/examples/yvg/results1.txt → baselines/aqua/examples/yvg/results1.txt
diff --git a/...marks/aqua/examples/yvg/results1_1200.txt → ...lines/aqua/examples/yvg/results1_1200.txt b/...marks/aqua/examples/yvg/results1_1200.txt → ...lines/aqua/examples/yvg/results1_1200.txt
diff --git a/benchmarks/aqua/examples/yvg/results2.txt → baselines/aqua/examples/yvg/results2.txt b/benchmarks/aqua/examples/yvg/results2.txt → baselines/aqua/examples/yvg/results2.txt
diff --git a/...marks/aqua/examples/yvg/results2_1200.txt → ...lines/aqua/examples/yvg/results2_1200.txt b/...marks/aqua/examples/yvg/results2_1200.txt → ...lines/aqua/examples/yvg/results2_1200.txt
diff --git a/...hmarks/aqua/examples/yvg/results_1200.txt → baselines/aqua/examples/yvg/results_1200.txt b/...hmarks/aqua/examples/yvg/results_1200.txt → baselines/aqua/examples/yvg/results_1200.txt
diff --git a/benchmarks/aqua/examples/yvg/yvg.data.R → baselines/aqua/examples/yvg/yvg.data.R b/benchmarks/aqua/examples/yvg/yvg.data.R → baselines/aqua/examples/yvg/yvg.data.R
diff --git a/benchmarks/aqua/examples/yvg/yvg.stan → baselines/aqua/examples/yvg/yvg.stan b/benchmarks/aqua/examples/yvg/yvg.stan → baselines/aqua/examples/yvg/yvg.stan
diff --git a/benchmarks/aqua/new/GPA/GPA.template → baselines/aqua/new/GPA/GPA.template b/benchmarks/aqua/new/GPA/GPA.template → baselines/aqua/new/GPA/GPA.template
diff --git a/benchmarks/aqua/new/GPA/analysis_d1.txt → baselines/aqua/new/GPA/analysis_d1.txt b/benchmarks/aqua/new/GPA/analysis_d1.txt → baselines/aqua/new/GPA/analysis_d1.txt
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diff --git a/benchmarks/aqua/new/GPA/analysis_g12.txt → baselines/aqua/new/GPA/analysis_g12.txt b/benchmarks/aqua/new/GPA/analysis_g12.txt → baselines/aqua/new/GPA/analysis_g12.txt
diff --git a/benchmarks/aqua/new/GPA/analysis_g21.txt → baselines/aqua/new/GPA/analysis_g21.txt b/benchmarks/aqua/new/GPA/analysis_g21.txt → baselines/aqua/new/GPA/analysis_g21.txt
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diff --git a/benchmarks/aqua/new/GPA/analysis_gpa1.txt → baselines/aqua/new/GPA/analysis_gpa1.txt b/benchmarks/aqua/new/GPA/analysis_gpa1.txt → baselines/aqua/new/GPA/analysis_gpa1.txt
diff --git a/benchmarks/aqua/new/GPA/analysis_gpa2.txt → baselines/aqua/new/GPA/analysis_gpa2.txt b/benchmarks/aqua/new/GPA/analysis_gpa2.txt → baselines/aqua/new/GPA/analysis_gpa2.txt
diff --git a/benchmarks/aqua/new/GPA/analysis_n.txt → baselines/aqua/new/GPA/analysis_n.txt b/benchmarks/aqua/new/GPA/analysis_n.txt → baselines/aqua/new/GPA/analysis_n.txt
diff --git a/benchmarks/aqua/new/GPA/results.txt → baselines/aqua/new/GPA/results.txt b/benchmarks/aqua/new/GPA/results.txt → baselines/aqua/new/GPA/results.txt
diff --git a/...s/aqua/new/addFun_sum/addFun_sum.template → ...s/aqua/new/addFun_sum/addFun_sum.template b/...s/aqua/new/addFun_sum/addFun_sum.template → ...s/aqua/new/addFun_sum/addFun_sum.template
diff --git a/...arks/aqua/new/addFun_sum/analysis_sum.txt → ...ines/aqua/new/addFun_sum/analysis_sum.txt b/...arks/aqua/new/addFun_sum/analysis_sum.txt → ...ines/aqua/new/addFun_sum/analysis_sum.txt
diff --git a/benchmarks/aqua/new/addFun_sum/results.txt → baselines/aqua/new/addFun_sum/results.txt b/benchmarks/aqua/new/addFun_sum/results.txt → baselines/aqua/new/addFun_sum/results.txt
diff --git a/...rks/aqua/new/clickGraph/analysis_b[1].txt → ...nes/aqua/new/clickGraph/analysis_b[1].txt b/...rks/aqua/new/clickGraph/analysis_b[1].txt → ...nes/aqua/new/clickGraph/analysis_b[1].txt
diff --git a/...rks/aqua/new/clickGraph/analysis_b[2].txt → ...nes/aqua/new/clickGraph/analysis_b[2].txt b/...rks/aqua/new/clickGraph/analysis_b[2].txt → ...nes/aqua/new/clickGraph/analysis_b[2].txt
diff --git a/...rks/aqua/new/clickGraph/analysis_x[1].txt → ...nes/aqua/new/clickGraph/analysis_x[1].txt b/...rks/aqua/new/clickGraph/analysis_x[1].txt → ...nes/aqua/new/clickGraph/analysis_x[1].txt
diff --git a/...rks/aqua/new/clickGraph/analysis_x[2].txt → ...nes/aqua/new/clickGraph/analysis_x[2].txt b/...rks/aqua/new/clickGraph/analysis_x[2].txt → ...nes/aqua/new/clickGraph/analysis_x[2].txt
diff --git a/...s/aqua/new/clickGraph/clickGraph.template → ...s/aqua/new/clickGraph/clickGraph.template b/...s/aqua/new/clickGraph/clickGraph.template → ...s/aqua/new/clickGraph/clickGraph.template
diff --git a/benchmarks/aqua/new/coinBias/analysis_d1.txt → baselines/aqua/new/coinBias/analysis_d1.txt b/benchmarks/aqua/new/coinBias/analysis_d1.txt → baselines/aqua/new/coinBias/analysis_d1.txt
diff --git a/benchmarks/aqua/new/coinBias/analysis_mu.txt → baselines/aqua/new/coinBias/analysis_mu.txt b/benchmarks/aqua/new/coinBias/analysis_mu.txt → baselines/aqua/new/coinBias/analysis_mu.txt
diff --git a/benchmarks/aqua/new/coinBias/coinBias.data.R → baselines/aqua/new/coinBias/coinBias.data.R b/benchmarks/aqua/new/coinBias/coinBias.data.R → baselines/aqua/new/coinBias/coinBias.data.R
diff --git a/benchmarks/aqua/new/coinBias/coinBias.stan → baselines/aqua/new/coinBias/coinBias.stan b/benchmarks/aqua/new/coinBias/coinBias.stan → baselines/aqua/new/coinBias/coinBias.stan
diff --git a/...marks/aqua/new/coinBias/coinBias.template → ...lines/aqua/new/coinBias/coinBias.template b/...marks/aqua/new/coinBias/coinBias.template → ...lines/aqua/new/coinBias/coinBias.template
diff --git a/benchmarks/aqua/new/coinBias/results.txt → baselines/aqua/new/coinBias/results.txt b/benchmarks/aqua/new/coinBias/results.txt → baselines/aqua/new/coinBias/results.txt
diff --git a/...hmarks/aqua/new/coinBias/results_1200.txt → baselines/aqua/new/coinBias/results_1200.txt b/...hmarks/aqua/new/coinBias/results_1200.txt → baselines/aqua/new/coinBias/results_1200.txt
diff --git a/...a/new/conjugate_gaussians/analysis_mu.txt → ...a/new/conjugate_gaussians/analysis_mu.txt b/...a/new/conjugate_gaussians/analysis_mu.txt → ...a/new/conjugate_gaussians/analysis_mu.txt
diff --git a/...gate_gaussians/conjugate_gaussians.data.R → ...gate_gaussians/conjugate_gaussians.data.R b/...gate_gaussians/conjugate_gaussians.data.R → ...gate_gaussians/conjugate_gaussians.data.R
diff --git a/...jugate_gaussians/conjugate_gaussians.stan → ...jugate_gaussians/conjugate_gaussians.stan b/...jugate_gaussians/conjugate_gaussians.stan → ...jugate_gaussians/conjugate_gaussians.stan
diff --git a/...te_gaussians/conjugate_gaussians_2.data.R → ...te_gaussians/conjugate_gaussians_2.data.R b/...te_gaussians/conjugate_gaussians_2.data.R → ...te_gaussians/conjugate_gaussians_2.data.R
diff --git a/.../aqua/new/conjugate_gaussians/results.txt → .../aqua/new/conjugate_gaussians/results.txt b/.../aqua/new/conjugate_gaussians/results.txt → .../aqua/new/conjugate_gaussians/results.txt
diff --git a/.../new/conjugate_gaussians/results_1200.txt → .../new/conjugate_gaussians/results_1200.txt b/.../new/conjugate_gaussians/results_1200.txt → .../new/conjugate_gaussians/results_1200.txt
diff --git a/benchmarks/aqua/new/pi/analysis_a1.txt → baselines/aqua/new/pi/analysis_a1.txt b/benchmarks/aqua/new/pi/analysis_a1.txt → baselines/aqua/new/pi/analysis_a1.txt
diff --git a/benchmarks/aqua/new/pi/analysis_a2.txt → baselines/aqua/new/pi/analysis_a2.txt b/benchmarks/aqua/new/pi/analysis_a2.txt → baselines/aqua/new/pi/analysis_a2.txt
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diff --git a/...arks/aqua/new/spacex/analysis_engines.txt → ...ines/aqua/new/spacex/analysis_engines.txt b/...arks/aqua/new/spacex/analysis_engines.txt → ...ines/aqua/new/spacex/analysis_engines.txt
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diff --git a/...aqua/new/spacex/analysis_second_stage.txt → ...aqua/new/spacex/analysis_second_stage.txt b/...aqua/new/spacex/analysis_second_stage.txt → ...aqua/new/spacex/analysis_second_stage.txt
diff --git a/benchmarks/aqua/new/spacex/spacex.template → baselines/aqua/new/spacex/spacex.template b/benchmarks/aqua/new/spacex/spacex.template → baselines/aqua/new/spacex/spacex.template
diff --git a/benchmarks/aqua/new/tug/analysis_alice.txt → baselines/aqua/new/tug/analysis_alice.txt b/benchmarks/aqua/new/tug/analysis_alice.txt → baselines/aqua/new/tug/analysis_alice.txt
diff --git a/benchmarks/aqua/new/tug/analysis_bob.txt → baselines/aqua/new/tug/analysis_bob.txt b/benchmarks/aqua/new/tug/analysis_bob.txt → baselines/aqua/new/tug/analysis_bob.txt
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diff --git a/...hmarks/aqua/new/tug/analysis_match[2].txt → baselines/aqua/new/tug/analysis_match[2].txt b/...hmarks/aqua/new/tug/analysis_match[2].txt → baselines/aqua/new/tug/analysis_match[2].txt
diff --git a/benchmarks/aqua/new/tug/tug.data.R → baselines/aqua/new/tug/tug.data.R b/benchmarks/aqua/new/tug/tug.data.R → baselines/aqua/new/tug/tug.data.R
diff --git a/benchmarks/aqua/new/tug/tug.stan → baselines/aqua/new/tug/tug.stan b/benchmarks/aqua/new/tug/tug.stan → baselines/aqua/new/tug/tug.stan
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diff --git a/...hmarks/aqua/new/weekend/analysis_hour.txt → baselines/aqua/new/weekend/analysis_hour.txt b/...hmarks/aqua/new/weekend/analysis_hour.txt → baselines/aqua/new/weekend/analysis_hour.txt
diff --git a/...s/aqua/new/weekend/analysis_isWeekend.txt → ...s/aqua/new/weekend/analysis_isWeekend.txt b/...s/aqua/new/weekend/analysis_isWeekend.txt → ...s/aqua/new/weekend/analysis_isWeekend.txt
diff --git a/benchmarks/aqua/new/weekend/weekend.template → baselines/aqua/new/weekend/weekend.template b/benchmarks/aqua/new/weekend/weekend.template → baselines/aqua/new/weekend/weekend.template
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diff --git a/.../aqua/stan_bench/altermu2/altermu2.data.R → .../aqua/stan_bench/altermu2/altermu2.data.R b/.../aqua/stan_bench/altermu2/altermu2.data.R → .../aqua/stan_bench/altermu2/altermu2.data.R
diff --git a/...ks/aqua/stan_bench/altermu2/altermu2.stan → ...es/aqua/stan_bench/altermu2/altermu2.stan b/...ks/aqua/stan_bench/altermu2/altermu2.stan → ...es/aqua/stan_bench/altermu2/altermu2.stan
diff --git a/...ua/stan_bench/altermu2/analysis_mu[1].txt → ...ua/stan_bench/altermu2/analysis_mu[1].txt b/...ua/stan_bench/altermu2/analysis_mu[1].txt → ...ua/stan_bench/altermu2/analysis_mu[1].txt
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diff --git a/...arks/aqua/stan_bench/altermu2/results.txt → ...ines/aqua/stan_bench/altermu2/results.txt b/...arks/aqua/stan_bench/altermu2/results.txt → ...ines/aqua/stan_bench/altermu2/results.txt
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diff --git a/...nch/conjugate_gaussians_2/analysis_mu.txt → ...nch/conjugate_gaussians_2/analysis_mu.txt b/...nch/conjugate_gaussians_2/analysis_mu.txt → ...nch/conjugate_gaussians_2/analysis_mu.txt
diff --git a/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R b/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R
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diff --git a/...ch/conjugate_gaussians_2/results_1200.txt → ...ch/conjugate_gaussians_2/results_1200.txt b/...ch/conjugate_gaussians_2/results_1200.txt → ...ch/conjugate_gaussians_2/results_1200.txt
diff --git a/...n_bench/normal_mixture/analysis_mu[1].txt → ...n_bench/normal_mixture/analysis_mu[1].txt b/...n_bench/normal_mixture/analysis_mu[1].txt → ...n_bench/normal_mixture/analysis_mu[1].txt
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diff --git a/benchmarks/aqua/stan_bench/tug/tug.stan → baselines/aqua/stan_bench/tug/tug.stan b/benchmarks/aqua/stan_bench/tug/tug.stan → baselines/aqua/stan_bench/tug/tug.stan
diff --git a/...s/aqua/stan_bench/zeroone/analysis_w1.txt → ...s/aqua/stan_bench/zeroone/analysis_w1.txt b/...s/aqua/stan_bench/zeroone/analysis_w1.txt → ...s/aqua/stan_bench/zeroone/analysis_w1.txt
diff --git a/...s/aqua/stan_bench/zeroone/analysis_w2.txt → ...s/aqua/stan_bench/zeroone/analysis_w2.txt b/...s/aqua/stan_bench/zeroone/analysis_w2.txt → ...s/aqua/stan_bench/zeroone/analysis_w2.txt
diff --git a/...marks/aqua/stan_bench/zeroone/results.txt → ...lines/aqua/stan_bench/zeroone/results.txt b/...marks/aqua/stan_bench/zeroone/results.txt → ...lines/aqua/stan_bench/zeroone/results.txt
diff --git a/...arks/aqua/stan_bench/zeroone/results2.txt → ...ines/aqua/stan_bench/zeroone/results2.txt b/...arks/aqua/stan_bench/zeroone/results2.txt → ...ines/aqua/stan_bench/zeroone/results2.txt
diff --git a/...aqua/stan_bench/zeroone/results2_1200.txt → ...aqua/stan_bench/zeroone/results2_1200.txt b/...aqua/stan_bench/zeroone/results2_1200.txt → ...aqua/stan_bench/zeroone/results2_1200.txt
diff --git a/.../aqua/stan_bench/zeroone/results_1200.txt → .../aqua/stan_bench/zeroone/results_1200.txt b/.../aqua/stan_bench/zeroone/results_1200.txt → .../aqua/stan_bench/zeroone/results_1200.txt
diff --git a/...ks/aqua/stan_bench/zeroone/zeroone.data.R → ...es/aqua/stan_bench/zeroone/zeroone.data.R b/...ks/aqua/stan_bench/zeroone/zeroone.data.R → ...es/aqua/stan_bench/zeroone/zeroone.data.R
diff --git a/...arks/aqua/stan_bench/zeroone/zeroone.stan → ...ines/aqua/stan_bench/zeroone/zeroone.stan b/...arks/aqua/stan_bench/zeroone/zeroone.stan → ...ines/aqua/stan_bench/zeroone/zeroone.stan
diff --git a/benchmarks/aqua/storm_bench/GPA/GPA.template → baselines/aqua/storm_bench/GPA/GPA.template b/benchmarks/aqua/storm_bench/GPA/GPA.template → baselines/aqua/storm_bench/GPA/GPA.template
diff --git a/...rks/aqua/storm_bench/GPA/analysis_GPA.txt → ...nes/aqua/storm_bench/GPA/analysis_GPA.txt b/...rks/aqua/storm_bench/GPA/analysis_GPA.txt → ...nes/aqua/storm_bench/GPA/analysis_GPA.txt
diff --git a/.../storm_bench/GPA/analysis_Nationality.txt → .../storm_bench/GPA/analysis_Nationality.txt b/.../storm_bench/GPA/analysis_Nationality.txt → .../storm_bench/GPA/analysis_Nationality.txt
diff --git a/...aqua/storm_bench/GPA/analysis_Perfect.txt → ...aqua/storm_bench/GPA/analysis_Perfect.txt b/...aqua/storm_bench/GPA/analysis_Perfect.txt → ...aqua/storm_bench/GPA/analysis_Perfect.txt
diff --git a/benchmarks/psi/GPA.psi → baselines/psi/GPA.psi b/benchmarks/psi/GPA.psi → baselines/psi/GPA.psi
diff --git a/benchmarks/psi/altermu2.psi → baselines/psi/altermu2.psi b/benchmarks/psi/altermu2.psi → baselines/psi/altermu2.psi
diff --git a/benchmarks/psi/clinicalTrial1.psi → baselines/psi/clinicalTrial1.psi b/benchmarks/psi/clinicalTrial1.psi → baselines/psi/clinicalTrial1.psi
diff --git a/benchmarks/psi/clinicalTrial2.psi → baselines/psi/clinicalTrial2.psi b/benchmarks/psi/clinicalTrial2.psi → baselines/psi/clinicalTrial2.psi
diff --git a/benchmarks/psi/coinBiasEquivalent.psi → baselines/psi/coinBiasEquivalent.psi b/benchmarks/psi/coinBiasEquivalent.psi → baselines/psi/coinBiasEquivalent.psi
diff --git a/benchmarks/psi/coinBiasModified.psi → baselines/psi/coinBiasModified.psi b/benchmarks/psi/coinBiasModified.psi → baselines/psi/coinBiasModified.psi
diff --git a/benchmarks/psi/conjugate_gaussians.psi → baselines/psi/conjugate_gaussians.psi b/benchmarks/psi/conjugate_gaussians.psi → baselines/psi/conjugate_gaussians.psi
diff --git a/...i/data/ClinicalTrial/dataControlGroup.csv → ...i/data/ClinicalTrial/dataControlGroup.csv b/...i/data/ClinicalTrial/dataControlGroup.csv → ...i/data/ClinicalTrial/dataControlGroup.csv
diff --git a/...i/data/ClinicalTrial/dataTreatedGroup.csv → ...i/data/ClinicalTrial/dataTreatedGroup.csv b/...i/data/ClinicalTrial/dataTreatedGroup.csv → ...i/data/ClinicalTrial/dataTreatedGroup.csv
diff --git a/...ks/psi/data/ClinicalTrial/extractHakaru.d → ...es/psi/data/ClinicalTrial/extractHakaru.d b/...ks/psi/data/ClinicalTrial/extractHakaru.d → ...es/psi/data/ClinicalTrial/extractHakaru.d
diff --git a/benchmarks/psi/data/ClinicalTrial/hakaru.mpl → baselines/psi/data/ClinicalTrial/hakaru.mpl b/benchmarks/psi/data/ClinicalTrial/hakaru.mpl → baselines/psi/data/ClinicalTrial/hakaru.mpl
diff --git a/benchmarks/psi/data/CoinBias/tosses.csv → baselines/psi/data/CoinBias/tosses.csv b/benchmarks/psi/data/CoinBias/tosses.csv → baselines/psi/data/CoinBias/tosses.csv
diff --git a/...marks/psi/data/TrueSkill_Simple/games.csv → ...lines/psi/data/TrueSkill_Simple/games.csv b/...marks/psi/data/TrueSkill_Simple/games.csv → ...lines/psi/data/TrueSkill_Simple/games.csv
diff --git a/...rks/psi/data/TrueSkill_Simple/players.csv → ...nes/psi/data/TrueSkill_Simple/players.csv b/...rks/psi/data/TrueSkill_Simple/players.csv → ...nes/psi/data/TrueSkill_Simple/players.csv
diff --git a/benchmarks/psi/gamma2.psi → baselines/psi/gamma2.psi b/benchmarks/psi/gamma2.psi → baselines/psi/gamma2.psi
diff --git a/benchmarks/psi/max.psi → baselines/psi/max.psi b/benchmarks/psi/max.psi → baselines/psi/max.psi
diff --git a/benchmarks/psi/normal_mixture.psi → baselines/psi/normal_mixture.psi b/benchmarks/psi/normal_mixture.psi → baselines/psi/normal_mixture.psi
diff --git a/benchmarks/psi/or.psi → baselines/psi/or.psi b/benchmarks/psi/or.psi → baselines/psi/or.psi
diff --git a/benchmarks/psi/or/generate_or.py → baselines/psi/or/generate_or.py b/benchmarks/psi/or/generate_or.py → baselines/psi/or/generate_or.py
diff --git a/benchmarks/psi/or/or.psi → baselines/psi/or/or.psi b/benchmarks/psi/or/or.psi → baselines/psi/or/or.psi
diff --git a/benchmarks/psi/or/or_10.psi → baselines/psi/or/or_10.psi b/benchmarks/psi/or/or_10.psi → baselines/psi/or/or_10.psi
diff --git a/benchmarks/psi/or/or_100.psi → baselines/psi/or/or_100.psi b/benchmarks/psi/or/or_100.psi → baselines/psi/or/or_100.psi
diff --git a/benchmarks/psi/or/or_15.psi → baselines/psi/or/or_15.psi b/benchmarks/psi/or/or_15.psi → baselines/psi/or/or_15.psi
diff --git a/benchmarks/psi/or/or_20.psi → baselines/psi/or/or_20.psi b/benchmarks/psi/or/or_20.psi → baselines/psi/or/or_20.psi
diff --git a/benchmarks/psi/or/or_20.py → baselines/psi/or/or_20.py b/benchmarks/psi/or/or_20.py → baselines/psi/or/or_20.py
diff --git a/benchmarks/psi/or/or_25.psi → baselines/psi/or/or_25.psi b/benchmarks/psi/or/or_25.psi → baselines/psi/or/or_25.psi
diff --git a/benchmarks/psi/or/or_30.psi → baselines/psi/or/or_30.psi b/benchmarks/psi/or/or_30.psi → baselines/psi/or/or_30.psi
diff --git a/benchmarks/psi/or/or_30.py → baselines/psi/or/or_30.py b/benchmarks/psi/or/or_30.py → baselines/psi/or/or_30.py
diff --git a/benchmarks/psi/or/or_35.psi → baselines/psi/or/or_35.psi b/benchmarks/psi/or/or_35.psi → baselines/psi/or/or_35.psi
diff --git a/benchmarks/psi/or/or_40.psi → baselines/psi/or/or_40.psi b/benchmarks/psi/or/or_40.psi → baselines/psi/or/or_40.psi
diff --git a/benchmarks/psi/or/or_40.py → baselines/psi/or/or_40.py b/benchmarks/psi/or/or_40.py → baselines/psi/or/or_40.py
diff --git a/benchmarks/psi/or/or_45.psi → baselines/psi/or/or_45.psi b/benchmarks/psi/or/or_45.psi → baselines/psi/or/or_45.psi
diff --git a/benchmarks/psi/or/or_5.psi → baselines/psi/or/or_5.psi b/benchmarks/psi/or/or_5.psi → baselines/psi/or/or_5.psi
diff --git a/benchmarks/psi/or/or_50.psi → baselines/psi/or/or_50.psi b/benchmarks/psi/or/or_50.psi → baselines/psi/or/or_50.psi
diff --git a/benchmarks/psi/or/or_50.py → baselines/psi/or/or_50.py b/benchmarks/psi/or/or_50.py → baselines/psi/or/or_50.py
diff --git a/benchmarks/psi/or/or_60.psi → baselines/psi/or/or_60.psi b/benchmarks/psi/or/or_60.psi → baselines/psi/or/or_60.psi
diff --git a/benchmarks/psi/or/or_60.py → baselines/psi/or/or_60.py b/benchmarks/psi/or/or_60.py → baselines/psi/or/or_60.py
diff --git a/benchmarks/psi/or/or_70.psi → baselines/psi/or/or_70.psi b/benchmarks/psi/or/or_70.psi → baselines/psi/or/or_70.psi
diff --git a/benchmarks/psi/or/or_70.py → baselines/psi/or/or_70.py b/benchmarks/psi/or/or_70.py → baselines/psi/or/or_70.py
diff --git a/benchmarks/psi/or/or_80.psi → baselines/psi/or/or_80.psi b/benchmarks/psi/or/or_80.psi → baselines/psi/or/or_80.psi
diff --git a/benchmarks/psi/or/or_80.py → baselines/psi/or/or_80.py b/benchmarks/psi/or/or_80.py → baselines/psi/or/or_80.py
diff --git a/benchmarks/psi/or/or_90.psi → baselines/psi/or/or_90.psi b/benchmarks/psi/or/or_90.psi → baselines/psi/or/or_90.psi
diff --git a/benchmarks/psi/or/or_90.py → baselines/psi/or/or_90.py b/benchmarks/psi/or/or_90.py → baselines/psi/or/or_90.py
diff --git a/benchmarks/psi/pi.psi → baselines/psi/pi.psi b/benchmarks/psi/pi.psi → baselines/psi/pi.psi
diff --git a/benchmarks/psi/spacex.psi → baselines/psi/spacex.psi b/benchmarks/psi/spacex.psi → baselines/psi/spacex.psi
diff --git a/benchmarks/psi/trueskill.psi → baselines/psi/trueskill.psi b/benchmarks/psi/trueskill.psi → baselines/psi/trueskill.psi
diff --git a/benchmarks/psi/tug_of_war.psi → baselines/psi/tug_of_war.psi b/benchmarks/psi/tug_of_war.psi → baselines/psi/tug_of_war.psi
diff --git a/benchmarks/psi/weekend.psi → baselines/psi/weekend.psi b/benchmarks/psi/weekend.psi → baselines/psi/weekend.psi
diff --git a/benchmarks/psi/zeroone.psi → baselines/psi/zeroone.psi b/benchmarks/psi/zeroone.psi → baselines/psi/zeroone.psi
diff --git a/benchmarks/stan/GPA/GPA.stan → baselines/stan/GPA/GPA.stan b/benchmarks/stan/GPA/GPA.stan → baselines/stan/GPA/GPA.stan
diff --git a/benchmarks/stan/addFun_max/addFun_max → baselines/stan/addFun_max/addFun_max b/benchmarks/stan/addFun_max/addFun_max → baselines/stan/addFun_max/addFun_max
diff --git a/benchmarks/stan/addFun_max/addFun_max.hpp → baselines/stan/addFun_max/addFun_max.hpp b/benchmarks/stan/addFun_max/addFun_max.hpp → baselines/stan/addFun_max/addFun_max.hpp
diff --git a/benchmarks/stan/addFun_max/addFun_max.stan → baselines/stan/addFun_max/addFun_max.stan b/benchmarks/stan/addFun_max/addFun_max.stan → baselines/stan/addFun_max/addFun_max.stan
diff --git a/benchmarks/stan/addFun_max/results_1200.txt → baselines/stan/addFun_max/results_1200.txt b/benchmarks/stan/addFun_max/results_1200.txt → baselines/stan/addFun_max/results_1200.txt
diff --git a/benchmarks/stan/addFun_sum/addFun_sum → baselines/stan/addFun_sum/addFun_sum b/benchmarks/stan/addFun_sum/addFun_sum → baselines/stan/addFun_sum/addFun_sum
diff --git a/benchmarks/stan/addFun_sum/addFun_sum.hpp → baselines/stan/addFun_sum/addFun_sum.hpp b/benchmarks/stan/addFun_sum/addFun_sum.hpp → baselines/stan/addFun_sum/addFun_sum.hpp
diff --git a/benchmarks/stan/addFun_sum/addFun_sum.stan → baselines/stan/addFun_sum/addFun_sum.stan b/benchmarks/stan/addFun_sum/addFun_sum.stan → baselines/stan/addFun_sum/addFun_sum.stan
diff --git a/benchmarks/stan/addFun_sum/results.txt → baselines/stan/addFun_sum/results.txt b/benchmarks/stan/addFun_sum/results.txt → baselines/stan/addFun_sum/results.txt
diff --git a/benchmarks/stan/addFun_sum/results_1200.txt → baselines/stan/addFun_sum/results_1200.txt b/benchmarks/stan/addFun_sum/results_1200.txt → baselines/stan/addFun_sum/results_1200.txt
diff --git a/benchmarks/stan/altermu2/altermu2 → baselines/stan/altermu2/altermu2 b/benchmarks/stan/altermu2/altermu2 → baselines/stan/altermu2/altermu2
diff --git a/benchmarks/stan/altermu2/altermu2.data.R → baselines/stan/altermu2/altermu2.data.R b/benchmarks/stan/altermu2/altermu2.data.R → baselines/stan/altermu2/altermu2.data.R
diff --git a/benchmarks/stan/altermu2/altermu2.hpp → baselines/stan/altermu2/altermu2.hpp b/benchmarks/stan/altermu2/altermu2.hpp → baselines/stan/altermu2/altermu2.hpp
diff --git a/benchmarks/stan/altermu2/altermu2.stan → baselines/stan/altermu2/altermu2.stan b/benchmarks/stan/altermu2/altermu2.stan → baselines/stan/altermu2/altermu2.stan
diff --git a/benchmarks/stan/altermu2/results.txt → baselines/stan/altermu2/results.txt b/benchmarks/stan/altermu2/results.txt → baselines/stan/altermu2/results.txt
diff --git a/benchmarks/stan/altermu2/results_1200.txt → baselines/stan/altermu2/results_1200.txt b/benchmarks/stan/altermu2/results_1200.txt → baselines/stan/altermu2/results_1200.txt
diff --git a/...tan/anova_radon_nopred/anova_radon_nopred → ...tan/anova_radon_nopred/anova_radon_nopred b/...tan/anova_radon_nopred/anova_radon_nopred → ...tan/anova_radon_nopred/anova_radon_nopred
diff --git a/...va_radon_nopred/anova_radon_nopred.data.R → ...va_radon_nopred/anova_radon_nopred.data.R b/...va_radon_nopred/anova_radon_nopred.data.R → ...va_radon_nopred/anova_radon_nopred.data.R
diff --git a/...anova_radon_nopred/anova_radon_nopred.hpp → ...anova_radon_nopred/anova_radon_nopred.hpp b/...anova_radon_nopred/anova_radon_nopred.hpp → ...anova_radon_nopred/anova_radon_nopred.hpp
diff --git a/...anova_radon_nopred/anova_radon_nopred.psi → ...anova_radon_nopred/anova_radon_nopred.psi b/...anova_radon_nopred/anova_radon_nopred.psi → ...anova_radon_nopred/anova_radon_nopred.psi
diff --git a/...nova_radon_nopred/anova_radon_nopred.stan → ...nova_radon_nopred/anova_radon_nopred.stan b/...nova_radon_nopred/anova_radon_nopred.stan → ...nova_radon_nopred/anova_radon_nopred.stan
diff --git a/...adon_nopred/anova_radon_nopred1obs.data.R → ...adon_nopred/anova_radon_nopred1obs.data.R b/...adon_nopred/anova_radon_nopred1obs.data.R → ...adon_nopred/anova_radon_nopred1obs.data.R
diff --git a/.../stan/anova_radon_nopred/results_1obs.txt → .../stan/anova_radon_nopred/results_1obs.txt b/.../stan/anova_radon_nopred/results_1obs.txt → .../stan/anova_radon_nopred/results_1obs.txt
diff --git a/...marks/stan/anova_radon_nopred/summary.txt → ...lines/stan/anova_radon_nopred/summary.txt b/...marks/stan/anova_radon_nopred/summary.txt → ...lines/stan/anova_radon_nopred/summary.txt
diff --git a/benchmarks/stan/clickGraph/clickGraph → baselines/stan/clickGraph/clickGraph b/benchmarks/stan/clickGraph/clickGraph → baselines/stan/clickGraph/clickGraph
diff --git a/benchmarks/stan/clickGraph/clickGraph.data.R → baselines/stan/clickGraph/clickGraph.data.R b/benchmarks/stan/clickGraph/clickGraph.data.R → baselines/stan/clickGraph/clickGraph.data.R
diff --git a/benchmarks/stan/clickGraph/clickGraph.hpp → baselines/stan/clickGraph/clickGraph.hpp b/benchmarks/stan/clickGraph/clickGraph.hpp → baselines/stan/clickGraph/clickGraph.hpp
diff --git a/benchmarks/stan/clickGraph/clickGraph.stan → baselines/stan/clickGraph/clickGraph.stan b/benchmarks/stan/clickGraph/clickGraph.stan → baselines/stan/clickGraph/clickGraph.stan
diff --git a/benchmarks/stan/clickGraph/clickGraph.txt → baselines/stan/clickGraph/clickGraph.txt b/benchmarks/stan/clickGraph/clickGraph.txt → baselines/stan/clickGraph/clickGraph.txt
diff --git a/benchmarks/stan/clickGraph/results.txt → baselines/stan/clickGraph/results.txt b/benchmarks/stan/clickGraph/results.txt → baselines/stan/clickGraph/results.txt
diff --git a/benchmarks/stan/clickGraph/results_1200.txt → baselines/stan/clickGraph/results_1200.txt b/benchmarks/stan/clickGraph/results_1200.txt → baselines/stan/clickGraph/results_1200.txt
diff --git a/...hmarks/stan/clinicalTrial1/clinicalTrial1 → baselines/stan/clinicalTrial1/clinicalTrial1 b/...hmarks/stan/clinicalTrial1/clinicalTrial1 → baselines/stan/clinicalTrial1/clinicalTrial1
diff --git a/...stan/clinicalTrial1/clinicalTrial1.data.R → ...stan/clinicalTrial1/clinicalTrial1.data.R b/...stan/clinicalTrial1/clinicalTrial1.data.R → ...stan/clinicalTrial1/clinicalTrial1.data.R
diff --git a/...ks/stan/clinicalTrial1/clinicalTrial1.hpp → ...es/stan/clinicalTrial1/clinicalTrial1.hpp b/...ks/stan/clinicalTrial1/clinicalTrial1.hpp → ...es/stan/clinicalTrial1/clinicalTrial1.hpp
diff --git a/...s/stan/clinicalTrial1/clinicalTrial1.stan → ...s/stan/clinicalTrial1/clinicalTrial1.stan b/...s/stan/clinicalTrial1/clinicalTrial1.stan → ...s/stan/clinicalTrial1/clinicalTrial1.stan
diff --git a/...ks/stan/clinicalTrial1/clinicalTrial1.txt → ...es/stan/clinicalTrial1/clinicalTrial1.txt b/...ks/stan/clinicalTrial1/clinicalTrial1.txt → ...es/stan/clinicalTrial1/clinicalTrial1.txt
diff --git a/...arks/stan/clinicalTrial1/results_1200.txt → ...ines/stan/clinicalTrial1/results_1200.txt b/...arks/stan/clinicalTrial1/results_1200.txt → ...ines/stan/clinicalTrial1/results_1200.txt
diff --git a/...hmarks/stan/clinicalTrial2/clinicalTrial2 → baselines/stan/clinicalTrial2/clinicalTrial2 b/...hmarks/stan/clinicalTrial2/clinicalTrial2 → baselines/stan/clinicalTrial2/clinicalTrial2
diff --git a/...stan/clinicalTrial2/clinicalTrial2.data.R → ...stan/clinicalTrial2/clinicalTrial2.data.R b/...stan/clinicalTrial2/clinicalTrial2.data.R → ...stan/clinicalTrial2/clinicalTrial2.data.R
diff --git a/...ks/stan/clinicalTrial2/clinicalTrial2.hpp → ...es/stan/clinicalTrial2/clinicalTrial2.hpp b/...ks/stan/clinicalTrial2/clinicalTrial2.hpp → ...es/stan/clinicalTrial2/clinicalTrial2.hpp
diff --git a/...s/stan/clinicalTrial2/clinicalTrial2.stan → ...s/stan/clinicalTrial2/clinicalTrial2.stan b/...s/stan/clinicalTrial2/clinicalTrial2.stan → ...s/stan/clinicalTrial2/clinicalTrial2.stan
diff --git a/...ks/stan/clinicalTrial2/clinicalTrial2.txt → ...es/stan/clinicalTrial2/clinicalTrial2.txt b/...ks/stan/clinicalTrial2/clinicalTrial2.txt → ...es/stan/clinicalTrial2/clinicalTrial2.txt
diff --git a/...arks/stan/clinicalTrial2/results_1200.txt → ...ines/stan/clinicalTrial2/results_1200.txt b/...arks/stan/clinicalTrial2/results_1200.txt → ...ines/stan/clinicalTrial2/results_1200.txt
diff --git a/benchmarks/stan/coinBias/coinBias → baselines/stan/coinBias/coinBias b/benchmarks/stan/coinBias/coinBias → baselines/stan/coinBias/coinBias
diff --git a/benchmarks/stan/coinBias/coinBias.data.R → baselines/stan/coinBias/coinBias.data.R b/benchmarks/stan/coinBias/coinBias.data.R → baselines/stan/coinBias/coinBias.data.R
diff --git a/benchmarks/stan/coinBias/coinBias.hpp → baselines/stan/coinBias/coinBias.hpp b/benchmarks/stan/coinBias/coinBias.hpp → baselines/stan/coinBias/coinBias.hpp
diff --git a/benchmarks/stan/coinBias/coinBias.stan → baselines/stan/coinBias/coinBias.stan b/benchmarks/stan/coinBias/coinBias.stan → baselines/stan/coinBias/coinBias.stan
diff --git a/benchmarks/stan/coinBias/results_1200.txt → baselines/stan/coinBias/results_1200.txt b/benchmarks/stan/coinBias/results_1200.txt → baselines/stan/coinBias/results_1200.txt
diff --git a/...n/conjugate_gaussians/conjugate_gaussians → ...n/conjugate_gaussians/conjugate_gaussians b/...n/conjugate_gaussians/conjugate_gaussians → ...n/conjugate_gaussians/conjugate_gaussians
diff --git a/...gate_gaussians/conjugate_gaussians.data.R → ...gate_gaussians/conjugate_gaussians.data.R b/...gate_gaussians/conjugate_gaussians.data.R → ...gate_gaussians/conjugate_gaussians.data.R
diff --git a/...njugate_gaussians/conjugate_gaussians.hpp → ...njugate_gaussians/conjugate_gaussians.hpp b/...njugate_gaussians/conjugate_gaussians.hpp → ...njugate_gaussians/conjugate_gaussians.hpp
diff --git a/...jugate_gaussians/conjugate_gaussians.stan → ...jugate_gaussians/conjugate_gaussians.stan b/...jugate_gaussians/conjugate_gaussians.stan → ...jugate_gaussians/conjugate_gaussians.stan
diff --git a/...te_gaussians/conjugate_gaussians_2.data.R → ...te_gaussians/conjugate_gaussians_2.data.R b/...te_gaussians/conjugate_gaussians_2.data.R → ...te_gaussians/conjugate_gaussians_2.data.R
diff --git a/...arks/stan/conjugate_gaussians/results.txt → ...ines/stan/conjugate_gaussians/results.txt b/...arks/stan/conjugate_gaussians/results.txt → ...ines/stan/conjugate_gaussians/results.txt
diff --git a/...stan/conjugate_gaussians/results_1200.txt → ...stan/conjugate_gaussians/results_1200.txt b/...stan/conjugate_gaussians/results_1200.txt → ...stan/conjugate_gaussians/results_1200.txt
diff --git a/...conjugate_gaussians_2/conjugate_gaussians → ...conjugate_gaussians_2/conjugate_gaussians b/...conjugate_gaussians_2/conjugate_gaussians → ...conjugate_gaussians_2/conjugate_gaussians
diff --git a/...te_gaussians_2/conjugate_gaussians.data.R → ...te_gaussians_2/conjugate_gaussians.data.R b/...te_gaussians_2/conjugate_gaussians.data.R → ...te_gaussians_2/conjugate_gaussians.data.R
diff --git a/...ugate_gaussians_2/conjugate_gaussians.hpp → ...ugate_gaussians_2/conjugate_gaussians.hpp b/...ugate_gaussians_2/conjugate_gaussians.hpp → ...ugate_gaussians_2/conjugate_gaussians.hpp
diff --git a/...njugate_gaussians_2/conjugate_gaussians_2 → ...njugate_gaussians_2/conjugate_gaussians_2 b/...njugate_gaussians_2/conjugate_gaussians_2 → ...njugate_gaussians_2/conjugate_gaussians_2
diff --git a/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R b/..._gaussians_2/conjugate_gaussians_2.data.R → ..._gaussians_2/conjugate_gaussians_2.data.R
diff --git a/...ate_gaussians_2/conjugate_gaussians_2.hpp → ...ate_gaussians_2/conjugate_gaussians_2.hpp b/...ate_gaussians_2/conjugate_gaussians_2.hpp → ...ate_gaussians_2/conjugate_gaussians_2.hpp
diff --git a/...te_gaussians_2/conjugate_gaussians_2.stan → ...te_gaussians_2/conjugate_gaussians_2.stan b/...te_gaussians_2/conjugate_gaussians_2.stan → ...te_gaussians_2/conjugate_gaussians_2.stan
diff --git a/...ks/stan/conjugate_gaussians_2/results.txt → ...es/stan/conjugate_gaussians_2/results.txt b/...ks/stan/conjugate_gaussians_2/results.txt → ...es/stan/conjugate_gaussians_2/results.txt
diff --git a/.../stan/conjugate_gaussians_2/results_1.txt → .../stan/conjugate_gaussians_2/results_1.txt b/.../stan/conjugate_gaussians_2/results_1.txt → .../stan/conjugate_gaussians_2/results_1.txt
diff --git a/...an/conjugate_gaussians_2/results_1200.txt → ...an/conjugate_gaussians_2/results_1200.txt b/...an/conjugate_gaussians_2/results_1200.txt → ...an/conjugate_gaussians_2/results_1200.txt
diff --git a/.../stan/conjugate_gaussians_2/results_2.txt → .../stan/conjugate_gaussians_2/results_2.txt b/.../stan/conjugate_gaussians_2/results_2.txt → .../stan/conjugate_gaussians_2/results_2.txt
diff --git a/.../stan/conjugate_gaussians_2/results_3.txt → .../stan/conjugate_gaussians_2/results_3.txt b/.../stan/conjugate_gaussians_2/results_3.txt → .../stan/conjugate_gaussians_2/results_3.txt
diff --git a/.../stan/conjugate_gaussians_2/results_4.txt → .../stan/conjugate_gaussians_2/results_4.txt b/.../stan/conjugate_gaussians_2/results_4.txt → .../stan/conjugate_gaussians_2/results_4.txt
diff --git a/.../stan/conjugate_gaussians_2/results_5.txt → .../stan/conjugate_gaussians_2/results_5.txt b/.../stan/conjugate_gaussians_2/results_5.txt → .../stan/conjugate_gaussians_2/results_5.txt
diff --git a/.../stan/conjugate_gaussians_2/results_6.txt → .../stan/conjugate_gaussians_2/results_6.txt b/.../stan/conjugate_gaussians_2/results_6.txt → .../stan/conjugate_gaussians_2/results_6.txt
diff --git a/.../stan/conjugate_gaussians_2/results_7.txt → .../stan/conjugate_gaussians_2/results_7.txt b/.../stan/conjugate_gaussians_2/results_7.txt → .../stan/conjugate_gaussians_2/results_7.txt
diff --git a/.../stan/conjugate_gaussians_2/results_8.txt → .../stan/conjugate_gaussians_2/results_8.txt b/.../stan/conjugate_gaussians_2/results_8.txt → .../stan/conjugate_gaussians_2/results_8.txt
diff --git a/...hmarks/stan/normal_mixture/normal_mixture → baselines/stan/normal_mixture/normal_mixture b/...hmarks/stan/normal_mixture/normal_mixture → baselines/stan/normal_mixture/normal_mixture
diff --git a/...stan/normal_mixture/normal_mixture.data.R → ...stan/normal_mixture/normal_mixture.data.R b/...stan/normal_mixture/normal_mixture.data.R → ...stan/normal_mixture/normal_mixture.data.R
diff --git a/...ks/stan/normal_mixture/normal_mixture.hpp → ...es/stan/normal_mixture/normal_mixture.hpp b/...ks/stan/normal_mixture/normal_mixture.hpp → ...es/stan/normal_mixture/normal_mixture.hpp
diff --git a/...s/stan/normal_mixture/normal_mixture.stan → ...s/stan/normal_mixture/normal_mixture.stan b/...s/stan/normal_mixture/normal_mixture.stan → ...s/stan/normal_mixture/normal_mixture.stan
diff --git a/benchmarks/stan/normal_mixture/results.txt → baselines/stan/normal_mixture/results.txt b/benchmarks/stan/normal_mixture/results.txt → baselines/stan/normal_mixture/results.txt
diff --git a/...arks/stan/normal_mixture/results_1200.txt → ...ines/stan/normal_mixture/results_1200.txt b/...arks/stan/normal_mixture/results_1200.txt → ...ines/stan/normal_mixture/results_1200.txt
diff --git a/benchmarks/stan/or/or → baselines/stan/or/or b/benchmarks/stan/or/or → baselines/stan/or/or
diff --git a/benchmarks/stan/or/or.data.R → baselines/stan/or/or.data.R b/benchmarks/stan/or/or.data.R → baselines/stan/or/or.data.R
diff --git a/benchmarks/stan/or/or.hpp → baselines/stan/or/or.hpp b/benchmarks/stan/or/or.hpp → baselines/stan/or/or.hpp
diff --git a/benchmarks/stan/or/or.stan → baselines/stan/or/or.stan b/benchmarks/stan/or/or.stan → baselines/stan/or/or.stan
diff --git a/benchmarks/stan/or/or_4.stan → baselines/stan/or/or_4.stan b/benchmarks/stan/or/or_4.stan → baselines/stan/or/or_4.stan
diff --git a/benchmarks/stan/or/temp → baselines/stan/or/temp b/benchmarks/stan/or/temp → baselines/stan/or/temp
diff --git a/benchmarks/stan/or/temp.hpp → baselines/stan/or/temp.hpp b/benchmarks/stan/or/temp.hpp → baselines/stan/or/temp.hpp
diff --git a/benchmarks/stan/or/temp.stan → baselines/stan/or/temp.stan b/benchmarks/stan/or/temp.stan → baselines/stan/or/temp.stan
diff --git a/benchmarks/stan/pi/pi → baselines/stan/pi/pi b/benchmarks/stan/pi/pi → baselines/stan/pi/pi
diff --git a/benchmarks/stan/pi/pi.hpp → baselines/stan/pi/pi.hpp b/benchmarks/stan/pi/pi.hpp → baselines/stan/pi/pi.hpp
diff --git a/benchmarks/stan/pi/pi.stan → baselines/stan/pi/pi.stan b/benchmarks/stan/pi/pi.stan → baselines/stan/pi/pi.stan
diff --git a/benchmarks/stan/pi/pi2.stan → baselines/stan/pi/pi2.stan b/benchmarks/stan/pi/pi2.stan → baselines/stan/pi/pi2.stan
diff --git a/benchmarks/stan/pi/results.txt → baselines/stan/pi/results.txt b/benchmarks/stan/pi/results.txt → baselines/stan/pi/results.txt
diff --git a/benchmarks/stan/pi/results_1200.txt → baselines/stan/pi/results_1200.txt b/benchmarks/stan/pi/results_1200.txt → baselines/stan/pi/results_1200.txt
diff --git a/benchmarks/stan/spacex/results.txt → baselines/stan/spacex/results.txt b/benchmarks/stan/spacex/results.txt → baselines/stan/spacex/results.txt
diff --git a/benchmarks/stan/spacex/results_1200.txt → baselines/stan/spacex/results_1200.txt b/benchmarks/stan/spacex/results_1200.txt → baselines/stan/spacex/results_1200.txt
diff --git a/benchmarks/stan/spacex/spacex → baselines/stan/spacex/spacex b/benchmarks/stan/spacex/spacex → baselines/stan/spacex/spacex
diff --git a/benchmarks/stan/spacex/spacex.hpp → baselines/stan/spacex/spacex.hpp b/benchmarks/stan/spacex/spacex.hpp → baselines/stan/spacex/spacex.hpp
diff --git a/benchmarks/stan/spacex/spacex.stan → baselines/stan/spacex/spacex.stan b/benchmarks/stan/spacex/spacex.stan → baselines/stan/spacex/spacex.stan
diff --git a/benchmarks/stan/trueskill/results_1200.txt → baselines/stan/trueskill/results_1200.txt b/benchmarks/stan/trueskill/results_1200.txt → baselines/stan/trueskill/results_1200.txt
diff --git a/benchmarks/stan/trueskill/trueskill → baselines/stan/trueskill/trueskill b/benchmarks/stan/trueskill/trueskill → baselines/stan/trueskill/trueskill
diff --git a/benchmarks/stan/trueskill/trueskill.data.R → baselines/stan/trueskill/trueskill.data.R b/benchmarks/stan/trueskill/trueskill.data.R → baselines/stan/trueskill/trueskill.data.R
diff --git a/benchmarks/stan/trueskill/trueskill.hpp → baselines/stan/trueskill/trueskill.hpp b/benchmarks/stan/trueskill/trueskill.hpp → baselines/stan/trueskill/trueskill.hpp
diff --git a/benchmarks/stan/trueskill/trueskill.stan → baselines/stan/trueskill/trueskill.stan b/benchmarks/stan/trueskill/trueskill.stan → baselines/stan/trueskill/trueskill.stan
diff --git a/benchmarks/stan/tug_of_war/results_1200.txt → baselines/stan/tug_of_war/results_1200.txt b/benchmarks/stan/tug_of_war/results_1200.txt → baselines/stan/tug_of_war/results_1200.txt
diff --git a/benchmarks/stan/tug_of_war/tug_of_war → baselines/stan/tug_of_war/tug_of_war b/benchmarks/stan/tug_of_war/tug_of_war → baselines/stan/tug_of_war/tug_of_war
diff --git a/benchmarks/stan/tug_of_war/tug_of_war.data.R → baselines/stan/tug_of_war/tug_of_war.data.R b/benchmarks/stan/tug_of_war/tug_of_war.data.R → baselines/stan/tug_of_war/tug_of_war.data.R
diff --git a/benchmarks/stan/tug_of_war/tug_of_war.hpp → baselines/stan/tug_of_war/tug_of_war.hpp b/benchmarks/stan/tug_of_war/tug_of_war.hpp → baselines/stan/tug_of_war/tug_of_war.hpp
diff --git a/benchmarks/stan/tug_of_war/tug_of_war.stan → baselines/stan/tug_of_war/tug_of_war.stan b/benchmarks/stan/tug_of_war/tug_of_war.stan → baselines/stan/tug_of_war/tug_of_war.stan
diff --git a/benchmarks/stan/tug_of_war/tug_of_war.txt → baselines/stan/tug_of_war/tug_of_war.txt b/benchmarks/stan/tug_of_war/tug_of_war.txt → baselines/stan/tug_of_war/tug_of_war.txt
diff --git a/benchmarks/stan/weekend/results.txt → baselines/stan/weekend/results.txt b/benchmarks/stan/weekend/results.txt → baselines/stan/weekend/results.txt
diff --git a/benchmarks/stan/weekend/results_1200.txt → baselines/stan/weekend/results_1200.txt b/benchmarks/stan/weekend/results_1200.txt → baselines/stan/weekend/results_1200.txt
diff --git a/benchmarks/stan/weekend/weekend → baselines/stan/weekend/weekend b/benchmarks/stan/weekend/weekend → baselines/stan/weekend/weekend
diff --git a/benchmarks/stan/weekend/weekend.data.R → baselines/stan/weekend/weekend.data.R b/benchmarks/stan/weekend/weekend.data.R → baselines/stan/weekend/weekend.data.R
diff --git a/benchmarks/stan/weekend/weekend.hpp → baselines/stan/weekend/weekend.hpp b/benchmarks/stan/weekend/weekend.hpp → baselines/stan/weekend/weekend.hpp
diff --git a/benchmarks/stan/weekend/weekend.stan → baselines/stan/weekend/weekend.stan b/benchmarks/stan/weekend/weekend.stan → baselines/stan/weekend/weekend.stan
diff --git a/benchmarks/stan/weekend2/weekend.stan → baselines/stan/weekend2/weekend.stan b/benchmarks/stan/weekend2/weekend.stan → baselines/stan/weekend2/weekend.stan
diff --git a/benchmarks/stan/zeroone/results.txt → baselines/stan/zeroone/results.txt b/benchmarks/stan/zeroone/results.txt → baselines/stan/zeroone/results.txt
diff --git a/benchmarks/stan/zeroone/results_1200.txt → baselines/stan/zeroone/results_1200.txt b/benchmarks/stan/zeroone/results_1200.txt → baselines/stan/zeroone/results_1200.txt
diff --git a/benchmarks/stan/zeroone/zeroone → baselines/stan/zeroone/zeroone b/benchmarks/stan/zeroone/zeroone → baselines/stan/zeroone/zeroone
diff --git a/benchmarks/stan/zeroone/zeroone.data.R → baselines/stan/zeroone/zeroone.data.R b/benchmarks/stan/zeroone/zeroone.data.R → baselines/stan/zeroone/zeroone.data.R
diff --git a/benchmarks/stan/zeroone/zeroone.hpp → baselines/stan/zeroone/zeroone.hpp b/benchmarks/stan/zeroone/zeroone.hpp → baselines/stan/zeroone/zeroone.hpp
diff --git a/benchmarks/stan/zeroone/zeroone.stan → baselines/stan/zeroone/zeroone.stan b/benchmarks/stan/zeroone/zeroone.stan → baselines/stan/zeroone/zeroone.stan
diff --git a/benchmarks/webppl/GPA/GPA.wppl → baselines/webppl/GPA/GPA.wppl b/benchmarks/webppl/GPA/GPA.wppl → baselines/webppl/GPA/GPA.wppl
diff --git a/benchmarks/webppl/GPA/GPA2.wppl → baselines/webppl/GPA/GPA2.wppl b/benchmarks/webppl/GPA/GPA2.wppl → baselines/webppl/GPA/GPA2.wppl
diff --git a/benchmarks/webppl/GPA/extract.py → baselines/webppl/GPA/extract.py b/benchmarks/webppl/GPA/extract.py → baselines/webppl/GPA/extract.py
diff --git a/benchmarks/webppl/GPA/run.sh → baselines/webppl/GPA/run.sh b/benchmarks/webppl/GPA/run.sh → baselines/webppl/GPA/run.sh
diff --git a/benchmarks/webppl/addFun_max/addFun_max.wppl → baselines/webppl/addFun_max/addFun_max.wppl b/benchmarks/webppl/addFun_max/addFun_max.wppl → baselines/webppl/addFun_max/addFun_max.wppl
diff --git a/benchmarks/webppl/addFun_max/run.sh → baselines/webppl/addFun_max/run.sh b/benchmarks/webppl/addFun_max/run.sh → baselines/webppl/addFun_max/run.sh
diff --git a/benchmarks/webppl/addFun_sum/addFun_sum.wppl → baselines/webppl/addFun_sum/addFun_sum.wppl b/benchmarks/webppl/addFun_sum/addFun_sum.wppl → baselines/webppl/addFun_sum/addFun_sum.wppl
diff --git a/benchmarks/webppl/addFun_sum/run.sh → baselines/webppl/addFun_sum/run.sh b/benchmarks/webppl/addFun_sum/run.sh → baselines/webppl/addFun_sum/run.sh
diff --git a/benchmarks/webppl/altermu2/altermu2.wppl → baselines/webppl/altermu2/altermu2.wppl b/benchmarks/webppl/altermu2/altermu2.wppl → baselines/webppl/altermu2/altermu2.wppl
diff --git a/benchmarks/webppl/altermu2/run.sh → baselines/webppl/altermu2/run.sh b/benchmarks/webppl/altermu2/run.sh → baselines/webppl/altermu2/run.sh
diff --git a/benchmarks/webppl/clickGraph/clickGraph.wppl → baselines/webppl/clickGraph/clickGraph.wppl b/benchmarks/webppl/clickGraph/clickGraph.wppl → baselines/webppl/clickGraph/clickGraph.wppl
diff --git a/benchmarks/webppl/clickGraph/run.sh → baselines/webppl/clickGraph/run.sh b/benchmarks/webppl/clickGraph/run.sh → baselines/webppl/clickGraph/run.sh
diff --git a/...webppl/clinicalTrial1/clinicalTrial1.wppl → ...webppl/clinicalTrial1/clinicalTrial1.wppl b/...webppl/clinicalTrial1/clinicalTrial1.wppl → ...webppl/clinicalTrial1/clinicalTrial1.wppl
diff --git a/benchmarks/webppl/clinicalTrial1/run.sh → baselines/webppl/clinicalTrial1/run.sh b/benchmarks/webppl/clinicalTrial1/run.sh → baselines/webppl/clinicalTrial1/run.sh
diff --git a/...webppl/clinicalTrial2/clinicalTrial2.wppl → ...webppl/clinicalTrial2/clinicalTrial2.wppl b/...webppl/clinicalTrial2/clinicalTrial2.wppl → ...webppl/clinicalTrial2/clinicalTrial2.wppl
diff --git a/benchmarks/webppl/clinicalTrial2/run.sh → baselines/webppl/clinicalTrial2/run.sh b/benchmarks/webppl/clinicalTrial2/run.sh → baselines/webppl/clinicalTrial2/run.sh