Code

Addition of step_warmup#117

Code

Merged

torfjelde merged 42 commits intomasterTuringLang/AbstractMCMC.jl:masterfrom torfjelde/step-warmupTuringLang/AbstractMCMC.jl:torfjelde/step-warmupCopy head branch name to clipboardOct 4, 2024

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Commits

Commits on Mar 9, 2023

• added step_warmup which is can be overloaded when convenient

  torfjelde

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  0987f5f

• added step_warmup to docs

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  30c9f12

• Update src/interface.jl

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Commits on Mar 10, 2023

• introduce new kwarg num_warmup to sample which uses step_warmup

  torfjelde

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  bd0bdc7

• updated docs

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  c620cca

• allow combination of discard_initial and num_warmup

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  572a286

• added docstring for mcmcsample

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• Merge branch 'torfjelde/step-warmup' of github.com:TuringLang/AbstractMCMC.jl into torfjelde/step-warmup

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  ca03832

• Apply suggestions from code review

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• Apply suggestions from code review

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• Update src/sample.jl

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  8e0ca53

• removed docstring and deferred description of keyword arguments to the docs

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  6877978

• Merge branch 'torfjelde/step-warmup' of github.com:TuringLang/AbstractMCMC.jl into torfjelde/step-warmup

  torfjelde

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  b3b3148

• Update src/sample.jl

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  ddc5254

• Update src/sample.jl

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  ffbd32f

• added num_warmup to common keyword arguments docs

  torfjelde

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  87480ff

• also allow step_warmup for the initial step

  torfjelde

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• Merge branch 'torfjelde/step-warmup' of github.com:TuringLang/AbstractMCMC.jl into torfjelde/step-warmup

  torfjelde

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  c00d0c9

• simplify logic for discarding fffinitial samples

  torfjelde

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  ef09c19

• Apply suggestions from code review

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• also report progress for the discarded samples

  torfjelde

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  f005746

• Merge branch 'torfjelde/step-warmup' of github.com:TuringLang/AbstractMCMC.jl into torfjelde/step-warmup

  torfjelde

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  9dccd8a

• Apply suggestions from code review

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• move progress-report to end of for-loop for discard samples

  torfjelde

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  7ce9f6b

Commits on Mar 13, 2023

• move step_warmup to the inner while loops too

  torfjelde

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  3a217b2

• Update src/sample.jl

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Commits on Apr 19, 2023

• Apply suggestions from code review

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  85d938f

• reverted to for-loop

  torfjelde

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  0a667a4

• Update src/sample.jl

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• added accidentanly removed comment

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  7603171

• Update src/sample.jl

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Commits on Oct 24, 2023

• Merge branch 'master' into torfjelde/step-warmup

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Commits on Oct 25, 2023

• Merge branch 'master' into torfjelde/step-warmup

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  1886fa8

Commits on Oct 26, 2023

• fixed formatting

  torfjelde

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  0ea293a

• fix typo

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Commits on Oct 4, 2024

• Merge branch 'master' into torfjelde/step-warmup

  torfjelde

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  44c55bb

• Apply suggestions from code review

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• Added testing of warmup steps

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  f9142a6

• Added checks as @devmotion requested

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  295fdc1

• Removed unintended change in previous commit

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  e6acb1f

• Bumped patch version

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  2e9fa5c

• Bump minor version instead of patch version since this is a new feature

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