Added navbar and removed insert_navbar.sh

dev/index.html

@@ -255,7 +255,7 @@
             <a class="ext-nav-link" href="https://turinglang.org/docs/tutorials/00-introduction/">Tutorials</a>
         </li>
         <li>
-            <p class="ext-nav-link" id="library-handler">Library API</p>
+            <p class="ext-nav-link" id="library-handler">Libraries</p>
             <div class="ext-dropdown" id="ext-dropdown-items">
                 <ul>
                     <li class="ext-dropdown-item-heading">Modellinglanguages</li>
@@ -454,6 +454,7 @@
     });
 </script>
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+
 <div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href>MCMCDiagnosticTools.jl</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>Home</a><ul class="internal"><li><a class="tocitem" href="#Background"><span>Background</span></a></li><li><a class="tocitem" href="#Effective-sample-size-and-\\widehat{R}"><span>Effective sample size and <span>$\widehat{R}$</span></span></a></li><li><a class="tocitem" href="#Monte-Carlo-standard-error"><span>Monte Carlo standard error</span></a></li><li><a class="tocitem" href="#R-diagnostic"><span>R⋆ diagnostic</span></a></li><li><a class="tocitem" href="#Bayesian-fraction-of-missing-information"><span>Bayesian fraction of missing information</span></a></li><li><a class="tocitem" href="#Other-diagnostics"><span>Other diagnostics</span></a></li></ul></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Home</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Home</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/TuringLang/MCMCDiagnosticTools.jl" title="View the repository on GitHub"><span class="docs-icon fa-brands"></span><span class="docs-label is-hidden-touch">GitHub</span></a><a class="docs-navbar-link" href="https://github.com/TuringLang/MCMCDiagnosticTools.jl/blob/main/docs/src/index.md" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="MCMCDiagnosticTools"><a class="docs-heading-anchor" href="#MCMCDiagnosticTools">MCMCDiagnosticTools</a><a id="MCMCDiagnosticTools-1"></a><a class="docs-heading-anchor-permalink" href="#MCMCDiagnosticTools" title="Permalink"></a></h1><p>MCMCDiagnosticTools provides functionality for diagnosing samples generated using Markov Chain Monte Carlo.</p><h2 id="Background"><a class="docs-heading-anchor" href="#Background">Background</a><a id="Background-1"></a><a class="docs-heading-anchor-permalink" href="#Background" title="Permalink"></a></h2><p>Some methods were originally part of <a href="https://github.com/brian-j-smith/Mamba.jl">Mamba.jl</a> and then <a href="https://github.com/TuringLang/MCMCChains.jl">MCMCChains.jl</a>. This package is a joint collaboration between the <a href="https://turinglang.org/">Turing</a> and <a href="https://www.arviz.org/">ArviZ</a> projects.</p><h2 id="Effective-sample-size-and-\\widehat{R}"><a class="docs-heading-anchor" href="#Effective-sample-size-and-\\widehat{R}">Effective sample size and <span>$\widehat{R}$</span></a><a id="Effective-sample-size-and-\\widehat{R}-1"></a><a class="docs-heading-anchor-permalink" href="#Effective-sample-size-and-\\widehat{R}" title="Permalink"></a></h2><article class="docstring"><header><a class="docstring-article-toggle-button fa-solid fa-chevron-down" href="javascript:;" title="Collapse docstring"></a><a class="docstring-binding" id="MCMCDiagnosticTools.ess" href="#MCMCDiagnosticTools.ess"><code>MCMCDiagnosticTools.ess</code></a> — <span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia hljs">ess(
     samples::AbstractArray{&lt;:Union{Missing,Real}};
     kind=:bulk,

previews/PR100/index.html

@@ -255,7 +255,7 @@
             <a class="ext-nav-link" href="https://turinglang.org/docs/tutorials/00-introduction/">Tutorials</a>
         </li>
         <li>
-            <p class="ext-nav-link" id="library-handler">Library API</p>
+            <p class="ext-nav-link" id="library-handler">Libraries</p>
             <div class="ext-dropdown" id="ext-dropdown-items">
                 <ul>
                     <li class="ext-dropdown-item-heading">Modellinglanguages</li>
@@ -454,6 +454,7 @@
     });
 </script>
 <!-- NAVBAR END -->
+
 <div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href>MCMCDiagnosticTools.jl</a></span></div><form class="docs-search" action="search/"><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>Home</a><ul class="internal"><li><a class="tocitem" href="#Effective-sample-size-and-\\widehat{R}"><span>Effective sample size and <span>$\widehat{R}$</span></span></a></li><li><a class="tocitem" href="#Monte-Carlo-standard-error"><span>Monte Carlo standard error</span></a></li><li><a class="tocitem" href="#R-diagnostic"><span>R⋆ diagnostic</span></a></li><li><a class="tocitem" href="#Bayesian-fraction-of-missing-information"><span>Bayesian fraction of missing information</span></a></li><li><a class="tocitem" href="#Other-diagnostics"><span>Other diagnostics</span></a></li></ul></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Home</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Home</a></li></ul></nav><div class="docs-right"><a class="docs-edit-link" href="https://github.com/TuringLang/MCMCDiagnosticTools.jl/blob/main/docs/src/index.md#" title="Edit on GitHub"><span class="docs-icon fab"></span><span class="docs-label is-hidden-touch">Edit on GitHub</span></a><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article class="content" id="documenter-page"><h1 id="MCMCDiagnosticTools"><a class="docs-heading-anchor" href="#MCMCDiagnosticTools">MCMCDiagnosticTools</a><a id="MCMCDiagnosticTools-1"></a><a class="docs-heading-anchor-permalink" href="#MCMCDiagnosticTools" title="Permalink"></a></h1><h2 id="Effective-sample-size-and-\\widehat{R}"><a class="docs-heading-anchor" href="#Effective-sample-size-and-\\widehat{R}">Effective sample size and <span>$\widehat{R}$</span></a><a id="Effective-sample-size-and-\\widehat{R}-1"></a><a class="docs-heading-anchor-permalink" href="#Effective-sample-size-and-\\widehat{R}" title="Permalink"></a></h2><article class="docstring"><header><a class="docstring-binding" id="MCMCDiagnosticTools.ess" href="#MCMCDiagnosticTools.ess"><code>MCMCDiagnosticTools.ess</code></a> — <span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia hljs">ess(
     samples::AbstractArray{&lt;:Union{Missing,Real}};
     kind=:bulk,

previews/PR100/search/index.html

@@ -255,7 +255,7 @@
             <a class="ext-nav-link" href="https://turinglang.org/docs/tutorials/00-introduction/">Tutorials</a>
         </li>
         <li>
-            <p class="ext-nav-link" id="library-handler">Library API</p>
+            <p class="ext-nav-link" id="library-handler">Libraries</p>
             <div class="ext-dropdown" id="ext-dropdown-items">
                 <ul>
                     <li class="ext-dropdown-item-heading">Modellinglanguages</li>
@@ -454,5 +454,6 @@
     });
 </script>
 <!-- NAVBAR END -->
+
 <div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href="../">MCMCDiagnosticTools.jl</a></span></div><form class="docs-search" action><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li><a class="tocitem" href="../">Home</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Search</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Search</a></li></ul></nav><div class="docs-right"><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article><p id="documenter-search-info">Loading search...</p><ul id="documenter-search-results"></ul></article><nav class="docs-footer"><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Tuesday 26 September 2023 00:15">Tuesday 26 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body><script src="../search_index.js"></script><script src="../assets/search.js"></script></html>
 

previews/PR101/index.html

@@ -255,7 +255,7 @@
             <a class="ext-nav-link" href="https://turinglang.org/docs/tutorials/00-introduction/">Tutorials</a>
         </li>
         <li>
-            <p class="ext-nav-link" id="library-handler">Library API</p>
+            <p class="ext-nav-link" id="library-handler">Libraries</p>
             <div class="ext-dropdown" id="ext-dropdown-items">
                 <ul>
                     <li class="ext-dropdown-item-heading">Modellinglanguages</li>
@@ -454,6 +454,7 @@
     });
 </script>
 <!-- NAVBAR END -->
+
 <div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href>MCMCDiagnosticTools.jl</a></span></div><form class="docs-search" action="search/"><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li class="is-active"><a class="tocitem" href>Home</a><ul class="internal"><li><a class="tocitem" href="#Effective-sample-size-and-\\widehat{R}"><span>Effective sample size and <span>$\widehat{R}$</span></span></a></li><li><a class="tocitem" href="#Monte-Carlo-standard-error"><span>Monte Carlo standard error</span></a></li><li><a class="tocitem" href="#R-diagnostic"><span>R⋆ diagnostic</span></a></li><li><a class="tocitem" href="#Bayesian-fraction-of-missing-information"><span>Bayesian fraction of missing information</span></a></li><li><a class="tocitem" href="#Other-diagnostics"><span>Other diagnostics</span></a></li></ul></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Home</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Home</a></li></ul></nav><div class="docs-right"><a class="docs-edit-link" href="https://github.com/TuringLang/MCMCDiagnosticTools.jl/blob/main/docs/src/index.md#" title="Edit on GitHub"><span class="docs-icon fab"></span><span class="docs-label is-hidden-touch">Edit on GitHub</span></a><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article class="content" id="documenter-page"><h1 id="MCMCDiagnosticTools"><a class="docs-heading-anchor" href="#MCMCDiagnosticTools">MCMCDiagnosticTools</a><a id="MCMCDiagnosticTools-1"></a><a class="docs-heading-anchor-permalink" href="#MCMCDiagnosticTools" title="Permalink"></a></h1><h2 id="Effective-sample-size-and-\\widehat{R}"><a class="docs-heading-anchor" href="#Effective-sample-size-and-\\widehat{R}">Effective sample size and <span>$\widehat{R}$</span></a><a id="Effective-sample-size-and-\\widehat{R}-1"></a><a class="docs-heading-anchor-permalink" href="#Effective-sample-size-and-\\widehat{R}" title="Permalink"></a></h2><article class="docstring"><header><a class="docstring-binding" id="MCMCDiagnosticTools.ess" href="#MCMCDiagnosticTools.ess"><code>MCMCDiagnosticTools.ess</code></a> — <span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia hljs">ess(
     samples::AbstractArray{&lt;:Union{Missing,Real}};
     kind=:bulk,

previews/PR101/search/index.html

@@ -255,7 +255,7 @@
             <a class="ext-nav-link" href="https://turinglang.org/docs/tutorials/00-introduction/">Tutorials</a>
         </li>
         <li>
-            <p class="ext-nav-link" id="library-handler">Library API</p>
+            <p class="ext-nav-link" id="library-handler">Libraries</p>
             <div class="ext-dropdown" id="ext-dropdown-items">
                 <ul>
                     <li class="ext-dropdown-item-heading">Modellinglanguages</li>
@@ -454,5 +454,6 @@
     });
 </script>
 <!-- NAVBAR END -->
+
 <div id="documenter"><nav class="docs-sidebar"><div class="docs-package-name"><span class="docs-autofit"><a href="../">MCMCDiagnosticTools.jl</a></span></div><form class="docs-search" action><input class="docs-search-query" id="documenter-search-query" name="q" type="text" placeholder="Search docs"/></form><ul class="docs-menu"><li><a class="tocitem" href="../">Home</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Search</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Search</a></li></ul></nav><div class="docs-right"><a class="docs-settings-button fas fa-cog" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-sidebar-button fa fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a></div></header><article><p id="documenter-search-info">Loading search...</p><ul id="documenter-search-results"></ul></article><nav class="docs-footer"><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Tuesday 26 September 2023 00:15">Tuesday 26 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body><script src="../search_index.js"></script><script src="../assets/search.js"></script></html>