output-list

Aligned.sortedByCoord.out.bam
Chimeric.out.junction
Chimeric.out.sam
Log.final.out
Log.out
Log.progress.out
SJ.out.tab
star-fusion.filter.intermediates_dir
star-fusion.fusion_candidates.final
star-fusion.fusion_candidates.final.abridged
star-fusion.fusion_candidates.final.abridged.FFPM
star-fusion.fusion_candidates.final.in_genelist.abridged
star-fusion.fusion_candidates.final.abridged.FFPM.ok
star-fusion.fusion_candidates.preliminary
star-fusion.fusion_candidates.preliminary.wSpliceInfo
star-fusion.fusion_candidates.preliminary.wSpliceInfo.ok
star-fusion.predict.intermediates_dir
star-fusion.STAR-Fusion.filter.ok
star-fusion.STAR-Fusion.predict.ok
_STARgenome
star.ok
_STARpass1
cytoBand.txt
FusionInspector.bed
FusionInspector.bed.sorted.bed.gz
FusionInspector.bed.sorted.bed.gz.tbi
FusionInspector.consolidated.cSorted.bam
FusionInspector.consolidated.cSorted.bam.bai
FusionInspector.fa
FusionInspector.fa.fai
FusionInspector.fusion_inspector_web.json
FusionInspector.fusion_predictions.final
FusionInspector.fusion_predictions.final.abridged
FusionInspector.fusion_predictions.final.abridged.FFPM
FusionInspector.gmap_trinity_GG.fusions.fasta
FusionInspector.gmap_trinity_GG.fusions.gff3
FusionInspector.gmap_trinity_GG.fusions.gff3.bed
FusionInspector.gmap_trinity_GG.fusions.gff3.bed.sorted.bed
FusionInspector.gmap_trinity_GG.fusions.gff3.bed.sorted.bed.gz
FusionInspector.gmap_trinity_GG.fusions.gff3.bed.sorted.bed.gz.tbi
FusionInspector.gtf
FusionInspector.igv.FusionJuncSpan
FusionInspector.junction_reads.bam
FusionInspector.junction_reads.bam.bai
FusionInspector.junction_reads.bam.bed
FusionInspector.junction_reads.bam.bed.sorted.bed.gz
FusionInspector.junction_reads.bam.bed.sorted.bed.gz.tbi
FusionInspector.spanning_reads.bam
FusionInspector.spanning_reads.bam.bai
FusionInspector.spanning_reads.bam.bed
FusionInspector.spanning_reads.bam.bed.sorted.bed.gz
FusionInspector.spanning_reads.bam.bed.sorted.bed.gz.tbi
JobRunner.log
workdir.cleaned