v1.7.1

What's Changed

• Feature/sample import update by @rernst in #53

Full Changelog: v1.7.0...v1.7.1

v1.7.0

What's Changed

• Feature/fix_conversion_email by @rernst in #45
• Illumina samplesheet bugfix by @rernst in #48
• Feature/tecan zuiveren normaliseren by @rernst in #49

Full Changelog: v1.6.3...v1.7.0

v1.6.3

• Illumina sample sheet: Create fallback for urgent samples if all projects are filled with >9 samples.

v1.6.2

• Sample export mip: Check if Dx Mip is set for sample.
• Fix vcf files in helix export file for samples that went through extra (fingerprint) step.

v1.6.0

• New functions to support MIP workflow in clarity LIMS.
• Update sample upload to support new sample names.

v1.5.3

• Helix export
  • Remove deprecated exports
  • Include gatk / exomedepth vcf fields in export file
• Illumina sample sheet: Use newest 'Protocolomschrijving' to determine project names.
• Update management review script with 2021 protocols.
• Mip multiplex pool sample sheet: Sort by input container and well.

v1.5.2

• Fix magnis samplesheet header

v1.5.1

• Caliper sample sheet: add rows for empty wells.
• Magnis sample sheet: remove tab between sample and machine.
• Sample indications export: select one (newest) indication if sample has two.
• Calculate average Q30: Get Q30 and yield from container UDF.

v1.5.0

• Magnis workflow support

v1.4.0

• MIP workflow functions requested by lab
• WES workflow function updates requested by lab
• Python 3 support
• Templates: Novaseq samplesheet templates
• Add export_sample_indications, reviewed in Add export_sample_indications #31