only run system lib step for windows #13
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| name: EJAM Installation | |
| on: | |
| push: | |
| branches: [ "main", "test" ] | |
| pull_request: | |
| branches: [ "main", "test" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| install_ejam: | |
| if: ${{ !github.event.repository.private }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macOS-latest] | |
| r-version: [4.3, 4.4] | |
| install-method: [github, url] # Matrix for installation method | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Restore R package cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }} | |
| key: ${{ runner.os }}-R-${{ matrix.r-version }}-${{ hashFiles('**/DESCRIPTION') }} | |
| restore-keys: ${{ runner.os }}-R-${{ matrix.r-version }}- | |
| - name: System Libraries | |
| if: runner.os != 'Windows' | |
| run: | | |
| if [ "${{ matrix.os }}" == "ubuntu-latest" ]; then | |
| sudo apt-get update | |
| sudo apt-get install -y libfontconfig1-dev libudunits2-dev libcairo2-dev libcurl4-openssl-dev \ | |
| libharfbuzz-dev libfribidi-dev libfreetype6-dev libpng-dev libtiff5-dev \ | |
| libjpeg-dev libgdal-dev libgeos-dev libproj-dev | |
| elif [ "${{ matrix.os }}" == "macOS-latest" ]; then | |
| brew install freetype udunits cairo harfbuzz fribidi libpng libtiff jpeg gdal pkg-config | |
| fi | |
| - name: Install EJAM (method- ${{ matrix.install-method }}) | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| install.packages("remotes") | |
| if("${{ matrix.install-method }}" == "github") { | |
| remotes::install_github( | |
| "${{ github.repository }}", # what owner/repo has the pkg to try to install | |
| dependencies=TRUE, | |
| force=TRUE, | |
| INSTALL_opts = c("--with-keep.source", "--install-tests") | |
| ) | |
| } else { | |
| # figure out the URL of the most recent release | |
| install.packages("gh") | |
| url_latest_release = function(owner_repo) { | |
| x = gh::gh(paste0("/repos/",owner_repo,"/releases")) | |
| dates = sapply(x, function(z) z$published_at) | |
| latest_url = x[[which.max(as.Date(dates))]]$html_url | |
| return(latest_url) | |
| } | |
| remotes::install_url( | |
| url = url_latest_release(owner_repo = "${{ github.repository }}"), | |
| #url = "https://github.com/USEPA/EJAM-open/archive/refs/tags/v2.32.1.tar.gz", | |
| dependencies = TRUE, | |
| auth_token = "" | |
| ) | |
| } | |
| shell: Rscript {0} | |
| - name: Restore R package cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }} | |
| key: ${{ runner.os }}-R-${{ matrix.r-version }}-${{ hashFiles('**/DESCRIPTION') }} | |
| restore-keys: ${{ runner.os }}-R-${{ matrix.r-version }}- | |
| - name: Test Installation | |
| run: | | |
| R -e 'library(EJAM); print("Package loaded successfully")' |