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Ids 932 publish project archive crate terms and update profile #24

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Ids 932 publish project archive crate terms and update profile #24

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e30c869
update project fields
JLoveUOA Dec 16, 2024
d87d036
update terms and add profile
JLoveUOA Dec 19, 2024
cbe0ff3
little formatting change
JLoveUOA Dec 19, 2024
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245 changes: 108 additions & 137 deletions Project-Archive-RoCrate-Profile/exampleCrate/ro-crate-metadata.json
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Original file line number Diff line number Diff line change
@@ -1,153 +1,124 @@
{
"@context": "https://w3id.org/ro/crate/1.1/context",
"@graph": [
"@context": "https://w3id.org/ro/crate/1.1/context",
"@graph": [
{
"@id": "./",
"@type": "Dataset",
"datePublished": "2024-12-16T00:17:52+00:00",
"mainEntity": [
{
"@id": "./",
"@type": "Dataset",
"conformsTo": [
"https://uoa-eresearch.github.io/Project-Archive-RoCrate-Profile/"
],
"dataClassification": [
"Sensitive"
],
"datePublished": "2024-10-03T01:05:33+00:00",
"hasPart": [
{
"@id": "Vault/pancreatoblastoma/raw/"
},
{
"@id": "Vault/pancreatoblastoma/bam/"
},
{
"@id": "Vault/pancreatoblastoma/raw/rna/"
},

{
"@id": "Vault/pancreatoblastoma/raw/rna/1806KHP-0132/A0006L_1.fastq.gz"
}
],
"name": [
"Example Project Archive Crate"
],
"project": [
{
"@id": "#cer01502"
}
],
"sourceOrganization": [
{
"@id": "#UOA_FMHS"
}
]
},
"@id": "#research_drive_service/reslig202200001-Tītoki-metabolomics"
}
]
},
{
"@id": "ro-crate-metadata.json",
"@type": "CreativeWork",
"about": {
"@id": "./"
},
"conformsTo": [
{
"@id": "ro-crate-metadata.json",
"@type": "CreativeWork",
"about": {
"@id": "./"
},
"conformsTo": {
"@id": "https://w3id.org/ro/crate/1.1"
}
"@id": "https://w3id.org/ro/crate/1.1"
},
{
"@id": "Vault/pancreatoblastoma/bam/",
"@type": "Dataset"
},
"@id": "https://uoa-eresearch.github.io/Project-Archive-RoCrate-Profile/"
}
]
},
{
"@id": "#medr894",
"@type": "Person",
"email": "[email protected]",
"fullName": "Melisa Edric"
},
{
"@id": "#member/100/ProjectTeamMember/medr894",
"@type": "OrganizationRole",
"member": [
{
"@id": "Vault/pancreatoblastoma/raw/rna/",
"@type": "Dataset"
},
"@id": "#medr894"
}
],
"name": "Project Team Member"
},
{
"@id": "#snic021",
"@type": "Person",
"email": "[email protected]",
"fullName": "Samina Nicholas"
},
{
"@id": "#member/100/ProjectOwner/snic021",
"@type": "OrganizationRole",
"member": [
{
"@id": "Vault/pancreatoblastoma/raw/rna/1806KHP-0132/A0006L_1.fastq.gz",
"@type": "File"
},
"@id": "#snic021"
}
],
"name": "Project Owner"
},
{
"@id": "#research_drive_service/reslig202200001-Tītoki-metabolomics",
"@type": "ResearchDriveService",
"allocatedGb": 25600.0,
"date": "2024-10-13T00:00:00",
"firstDay": "2022-01-09T00:00:00",
"freeGb": 24004.5,
"name": "reslig202200001-Tītoki-metabolomics",
"percentageUsed": 2.75578,
"project": [
{
"@id": "#jcar001",
"@type": "Person",
"email": "[email protected]",
"identifier": "https://orcid.org/0000-0001-7760-1240",
"name": "Josiah Carberry"
},
"@id": "#project/100"
}
],
"usedGb": 1596.0
},
{
"@id": "retention_period_for/#research_drive_service/reslig202200001-Tītoki-metabolomics",
"@type": "DeleteAction",
"actionStatus": "PotentialActionStatus",
"endTime": "2030-11-04T00:00:00",
"targetCollection": [
{
"@id": "#tmon023",
"@type": "Person",
"email": "[email protected]",
"name": "TeamMember1"
},
"@id": "#research_drive_service/reslig202200001-Tītoki-metabolomics"
}
]
},
{
"@id": "#project/100",
"@type": "ResearchProject",
"actions": [
{
"@id": "#tmtw023",
"@type": "Person",
"email": "[email protected]",
"name": "TeamMember2"
},
"@id": "retention_period_for/#research_drive_service/reslig202200001-Tītoki-metabolomics"
}
],
"dataClassification": "Sensitive",
"description": "Stress in plants could be defined as any change in growth condition(s) that disrupts metabolic homeostasis and requires an adjustment of metabolic pathways in a process that is usually referred to as acclimation. Metabolomics could contribute significantly to the study of stress biology in plants and other organisms by identifying different compounds, such as by-products of stress metabolism, stress signal transduction molecules or molecules that are part of the acclimation response of plants.",
"division": "Liggins Institute",
"endDate": "2024-11-04T00:00:00",
"identifier": [
"uoa00001",
"reslig202200001"
],
"isCompleted": true,
"member": [
{
"@id": "#UOA_FMHS",
"@type": "Organization",
"name": "University Of Auckland Faculty of Medical and Health Science"
"@id": "#member/100/ProjectTeamMember/medr894"
},
{
"@id": "#cer01502",
"@type": "Project",
"dataContact": [
{
"@id": "#tmon023"
},
{
"@id": "#tmtw023"
}
],
"dataOwner": [
{
"@id": "#tmon023"
},
{
"@id": "#tmtw023"
}
],
"description": "Further insights from many sources about signal cascade receptor are. Heart cytokines with heart strengthening drugs positively isotropic as with the platelets too strong for therapies.",
"division": "CIVENV",
"dropbox": "virtualeyes-lab",
"endDate": "2024-10-02",
"identifier": [
"ressci202400001",
"1507"
],
"member": [
{
"@id": "#jcar001"
},
{
"@id": "#tmon023"
},
{
"@id": "#tmtw023"
}
],
"name": "Polaris and Bioinformatics",
"projectOwner": [
{
"@id": "#jcar001"
}
],
"requirements": "Part of a funded project research,Requires human ethics research",
"researchDrive": "ressci202400001-polaris-bioinformatics",
"service": [
"cbarpuptst01",
"sc-cer00466-2"
],
"startDate": "2024-10-02"
},
"@id": "#member/100/ProjectOwner/snic021"
}
],
"name": "Tītoki metabolomics",
"retentionPeriodYears": 6,
"services": [
{
"@id": "#DeleteArchiveAction",
"@type": "DeleteAction",
"actionStatus": "PotentialActionStatus",
"endTime": "2024-10-02",
"targetCollection": [
{
"@id": "./"
}
]
"@id": "#research_drive_service/reslig202200001-Tītoki-metabolomics"
}
]
],
"startDate": "2022-01-01T00:00:00",
"updatedTime": "2024-12-16T13:17:52.290170"
}
]
}
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