v1.0.0

Commits

• [00b9682]: ignore R project files (rory-improbable) #149
• [f9be7bf]: copy of microsim_model file (rory-improbable) #149
• [bb3cebb]: store age snapshot (rory-improbable) #149
• [da87a44]: separate snapshotter class (rory-improbable) #149
• [3716b11]: cache each location dataframe (rory-improbable) #149
• [0b4042f]: cache activity names (rory-improbable) #149
• [bc23dc7]: loading from cache works (rory-improbable) #149
• [6a6f3b9]: code to get place ids and flows (rory-improbable) #149
• [82f3ffc]: calculate flows with correct datatypes (rory-improbable) #149
• [5d7daac]: add progress bar for processing people (rory-improbable) #149
• [eb8a7c9]: store place types and coordinates (rory-improbable) #149
• [b0473ee]: uncomment people snapshot code (rory-improbable) #149
• [f0f7e9d]: add comments (rory-improbable) #149
• [0e73d6b]: add snapshotter test (rory-improbable) #149
• [d77a4e6]: correct indices for adding to array (rory-improbable) #149
• [307a636]: add truncation and separation of big array (rory-improbable) #149
• [2bc4780]: correct sorting of 3D array (rory-improbable) #149
• [b5b3182]: add extra person to test data (rory-improbable) #149
• [ab37763]: tests pass (rory-improbable) #149
• [cfa2bf5]: process place ids and place flows arrays separately (rory-improbable) #149
• [8a6c482]: correct length for activity location arrays (rory-improbable) #149
• [267ab28]: speed up people processing (rory-improbable) #149
• [ae11562]: speed up processing place data (rory-improbable) #149
• [8832b3b]: add test for getting place data (rory-improbable) #149
• [bbc5c5b]: change snapshot filenames (rory-improbable) #149
• [45956b7]: test writing snapshot files (rory-improbable) #149
• [4366668]: load activity_names enum (rory-improbable) #149
• [8b21165]: use sentinel value instead of zero (rory-improbable) #149
• [b472fd7]: get msoa coordinates for homes (rory-improbable) #149
• [e36bb4a]: add jitter to home coordinates (rory-improbable) #149
• [76f5512]: merge from master (rory-improbable) #149
• [fe2cbd3]: fix sentinel value (rory-improbable) #149
• [eaf3d78]: remove unused import (rory-improbable) #149
• [03ed3ba]: fix sentinel value in tests (rory-improbable) #149
• [3151cdd]: initial pipeline for loading buildings and msoa shapes (rory-improbable) #149
• [1a1fcef]: correct coordinate projection code (rory-improbable) #149
• [ed92574]: add todo (rory-improbable) #149
• [59230b5]: fix point within geometry check (rory-improbable) #149
• [eab1f37]: write points to JSON file (rory-improbable) #149
• [3524e4f]: select home locations from buildings (rory-improbable) #149
• [d9ce027]: remove commented line (rory-improbable) #149
• [1bfd438]: use osm shapefile and geopandas (rory-improbable) #149
• [42b24b4]: remove commented code (rory-improbable) #149
• [777adb7]: add correct total (rory-improbable) #149
• [94ba119]: add explanatory comment (rory-improbable) #149
• [14a891d]: store area codes and not home probs (rory-improbable) #149
• [88a9d3a]: add area codes and pnothome to test snapshot (rory-improbable) #149
• [81c1bdd]: adjust not home probs (rory-improbable) #149
• [3173837]: correctly initialise test dataframes (rory-improbable) #149
• [0b5710e]: fix place coordinates test (rory-improbable) #149
• [8f6a44b]: merge from master (rory-improbable) #149
• [80e59ee]: updated config (rory-improbable) #149
• [57dfdb4]: Merge branch 'master' into rory/model-state-snapshot (rory-improbable) #149
• [f1147d3]: pass correct data_dir to snapshotter (rory-improbable) #149
• [c4435fa]: write pickle files (rory-improbable) #148
• [6db81b4]: reminder to replace age counts index (rory-improbable) #148
• [64cf222]: stripped down dashboard works (rory-improbable) #148
• [86ed55a]: add coordinate dependency to environment@ (Rory) #149
• [dfb0346]: merge from master (Rory) #149
• [7278611]: add opencl code (Rory) #149
• [630399e]: fix module paths (Rory) #149
• [421c523]: exxtrat population initialisation and add main class (Rory) #149
• [e243fba]: pass data_dir argument to population (Rory) #149
• [2a2ed04]: code to convert opencl snapshot (Rory) #149
• [91382a7]: formatting (Rory) #149
• [07d0bd6]: add lockdown multipliers to snapshot (Rory) #149
• [08452b9]: add cache (Rory) #149
• [5a7c907]: fix cache filepaths (Rory) #149
• [cc7e281]: pickle dict correctly (Rory) #149
• [4cc40ae]: correct cache filepath (Rory) #149
• [9f40b28]: remove incorrect argument (Rory) #149
• [1884d76]: remove cache from snapshotconvertor (Rory) #149
• [f4b792d]: correct caching logic for snapshots (Rory) #149
• [07500a0]: check if snapshot cache file exists@ (Rory) #149
• [ec0ed49]: retrieve lockdown series and git lfs store msoa buildings (Rory) #149
• [05e8a6b]: correct kernels path (Rory) #149
• [65e6039]: fix filepaths (Rory) #149
• [27c86c5]: fix snapshot paths (Rory) #149
• [e3275b7]: dashboard works (Rory) #149
• [4e18d33]: create output dir if it does not exist (Rory) #149
• [1356553]: update readme (Rory) #149
• [331e695]: update microsim readme (Rory) #149
• [782baa5]: update opencl readme (Rory) #149
• [427bf59]: move opencl tests (Rory) #149
• [d308652]: add comments and docstrings (Rory) #149
• [7943d0a]: move snapshot converter test (Rory) #149
• [96300ff]: install convertbng via pip (Rory) #149
• [cb7e38c]: some tests pass (Rory) #149
• [7cb75d9]: population initialisation tests pass (Rory) #149
• [d1f6c2e]: microsim tests pass (Rory) #149
• [ba5c746]: add extra assertion (Rory) #149
• [582592d]: fix paths in opencl tests (Rory) #149
• [21eabc6]: use CPU for opencl tests (Rory) #149
• [0d6fa77]: snapshot tests work (Rory) #149
• [8320bf9]: change temp snapshot path (Rory) #149
• [00b4e7f]: update flows test works (Rory) #149
• [1d7c6ca]: increase number of samples (Rory) #149
• [d6bdb8c]: pass params from YAML file to opencl simulation (Rory) #149
• [fc66d03]: set params outside of caching (Rory) #149
• [f77f420]: Added scipy and pyopencl (Nick Malleson) #149
• [8b6d06c]: this line will install opencl model pip requirements (Alex Coleman) #150
• [00d7d6e]: fix params error (Rory) #149
• [2341893]: Merge branch 'add-opencl-model' of github.com:Urban-Analytics/RAMP-UA into add-opencl-model (Rory) #149
• [2886b9f]: add pyopencl to requirements.txt (Rory) #149
• [c1e85d9]: use pocl conda package (Rory) #149
• [15c8967]: add dummy data for msoa buildings (Rory) #149
• [b6d819a]: test uses dummy data (Rory) #149
• [f74579a]: address Charlie's PR comments (Rory) #149
• [ea73ed8]: fix labels in headless printout (Rory) #149
• [bb0c8a4]: revert changes to dashboard config (Rory) #149
• [34ce5de]: dont set snapshot time - causes bug in UI (Rory) #149
• [f760f0e]: initial notebook to run simulation (Rory) #149
• [30a4639]: runs in jupyter notebook (Rory) #149
• [1423c9d]: plotting in notebook (Rory) #149
• [14b8f8e]: fix argument order (Rory) #149
• [0a11b1f]: plot age bins by status (Rory) #149
• [f0fa131]: plot ages in jupyter notebook@ (Rory) #149
• [4df3271]: plot msoa area data using geopandas (Rory) #149
• [52a948a]: run notebook from start to finish (Rory) #149
• [d9bfafd]: use os path join (Rory) #149
• [9cf50c0]: fixed duplicate parameters in click (Nick Malleson) #149
• [2128e66]: snapshot creation failed for me if the snapshots directory didnt exist, so I have added one and told git not to add any of the files that get added to it (Nick Malleson) #149
• [fb0c9a6]: minor (Nick Malleson) #149
• [4dfce65]: bump version number for v1.0.0 (Alex Coleman) #152